RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 ERFEQ4G0M1 354 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 TMEM63CQ9P1W3 806 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 ZNF532Q9HCE3 1301 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 ZNF213O14771 459 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 RASGRF1Q13972 1273 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 ANKRD18AQ8IVF6 992 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 ZNF274Q96GC6 653 aaPredicted RBP20.64■□□□□ 0.89
LMNA-205ENST00000368299 GJD4Q96KN9 370 aaPredicted RBP20.64■□□□□ 0.89
LMNA-205ENST00000368299 LRRC2Q9BYS8 371 aa20.64■□□□□ 0.89
LMNA-205ENST00000368299 CCNL1Q9UK58 526 aaPredicted RBP20.64■□□□□ 0.89
LMNA-205ENST00000368299 NSFL1CQ9UNZ2 370 aaKnown RBP20.64■□□□□ 0.89
LMNA-205ENST00000368299 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
LMNA-205ENST00000368299 UBE2HP62256 183 aa20.63■□□□□ 0.89
LMNA-205ENST00000368299 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
LMNA-205ENST00000368299 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
LMNA-205ENST00000368299 KIF3AQ9Y496 699 aa20.63■□□□□ 0.89
LMNA-205ENST00000368299 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 KCNQ4P56696 695 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 SCRN1Q12765 414 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 WDR19Q8NEZ3 1342 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 ZPR1O75312 459 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 PHF14O94880 888 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
LMNA-205ENST00000368299 NCOA7Q8NI08 942 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
LMNA-205ENST00000368299 BSDC1Q9NW68 430 aaPredicted RBP20.62■□□□□ 0.89
LMNA-205ENST00000368299 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
LMNA-205ENST00000368299 GNPATO15228 680 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 MCM5P33992 734 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 EVCP57679 992 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 TBC1D9BQ66K14 1250 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 SETDB2Q96T68 719 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 DNM1Q05193 864 aaKnown RBP20.61■□□□□ 0.89
LMNA-205ENST00000368299 APOBRQ0VD83 1088 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 CDC37L1Q7L3B6 337 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 RALYLQ86SE5 291 aaKnown RBP20.61■□□□□ 0.89
LMNA-205ENST00000368299 AIDAQ96BJ3 306 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
LMNA-205ENST00000368299 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
LMNA-205ENST00000368299 LRSAM1Q6UWE0 723 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 ZMYM6O95789 1325 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 TCHHQ07283 1943 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 ONECUT3O60422 494 aaPredicted RBP20.6■□□□□ 0.89
LMNA-205ENST00000368299 HAND2P61296 217 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 KRT85P78386 507 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 UBE4AQ14139 1066 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 FAM184AQ8NB25 1140 aa20.6■□□□□ 0.89
LMNA-205ENST00000368299 DOCK2Q92608 1830 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 SNAP23O00161 211 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 FIBPO43427 364 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 JAK2O60674 1132 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 BCAMP50895 628 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 ALX1Q15699 326 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 BICDL1Q6ZP65 573 aa20.59■□□□□ 0.89
LMNA-205ENST00000368299 MB21D2Q8IYB1 491 aaPredicted RBP20.59■□□□□ 0.89
LMNA-205ENST00000368299 GNL3LQ9NVN8 582 aaKnown RBP20.59■□□□□ 0.89
LMNA-205ENST00000368299 NASPP49321 788 aaPredicted RBP20.58■□□□□ 0.89
LMNA-205ENST00000368299 TRDNQ13061 729 aa20.58■□□□□ 0.89
LMNA-205ENST00000368299 KLHL34Q8N239 644 aa20.58■□□□□ 0.89
LMNA-205ENST00000368299 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.89
LMNA-205ENST00000368299 ESPNB1AK53 854 aa20.58■□□□□ 0.88
LMNA-205ENST00000368299 DTNBO60941 627 aa20.58■□□□□ 0.88
LMNA-205ENST00000368299 PDIA3P30101 505 aaKnown RBP20.58■□□□□ 0.88
LMNA-205ENST00000368299 NBPF5PQ86XG9 351 aaPredicted RBP20.58■□□□□ 0.88
LMNA-205ENST00000368299 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.88
LMNA-205ENST00000368299 NSUN7Q8NE18 718 aaKnown RBP20.58■□□□□ 0.88
LMNA-205ENST00000368299 NLRP3Q96P20 1036 aa20.58■□□□□ 0.88
LMNA-205ENST00000368299 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 SYCE3A1L190 88 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 APPP05067 770 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 TPTE2Q6XPS3 522 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 CERKQ8TCT0 537 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 ANP32BQ92688 251 aaKnown RBP20.57■□□□□ 0.88
LMNA-205ENST00000368299 TRIM44Q96DX7 344 aaPredicted RBP20.57■□□□□ 0.88
LMNA-205ENST00000368299 ELP1O95163 1332 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 AFF2P51816 1311 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 PRC1O43663 620 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
LMNA-205ENST00000368299 TRPC5Q9UL62 973 aaPredicted RBP20.57■□□□□ 0.88
LMNA-205ENST00000368299 LY75O60449 1722 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 COL24A1Q17RW2 1714 aa20.57■□□□□ 0.88
LMNA-205ENST00000368299 PATL2C9JE40 543 aaKnown RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 H3BQV1 296 aa20.56■□□□□ 0.88
LMNA-205ENST00000368299 LETM1O95202 739 aaPredicted RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 GNAT2P19087 354 aa20.56■□□□□ 0.88
LMNA-205ENST00000368299 IFFO2Q5TF58 517 aa20.56■□□□□ 0.88
LMNA-205ENST00000368299 CHST3Q7LGC8 479 aa20.56■□□□□ 0.88
LMNA-205ENST00000368299 SCAND2PQ9GZW5 306 aaPredicted RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 SRP68Q9UHB9 627 aaKnown RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 DHX16O60231 1041 aaKnown RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 FERMT3Q86UX7 667 aa20.56■□□□□ 0.88
LMNA-205ENST00000368299 MYO5AQ9Y4I1 1855 aaKnown RBP20.56■□□□□ 0.88
LMNA-205ENST00000368299 PTPDC1A2A3K4 754 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
LMNA-205ENST00000368299 CAVIN4Q5BKX8 364 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms