RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
LINC00272-201ENST00000367563 FKBP1BP68106 108 aa11.2□□□□□ -0.62
LINC00272-201ENST00000367563 NBPF9Q3BBW0 867 aa11.2□□□□□ -0.62
LINC00272-201ENST00000367563 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
LINC00272-201ENST00000367563 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
LINC00272-201ENST00000367563 GPR25O00155 361 aa11.19□□□□□ -0.62
LINC00272-201ENST00000367563 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00272-201ENST00000367563 TRIM28Q13263 835 aaKnown RBP11.19□□□□□ -0.62
LINC00272-201ENST00000367563 ZBTB38Q8NAP3 1195 aaPredicted RBP11.19□□□□□ -0.62
LINC00272-201ENST00000367563 SLC39A7Q92504 469 aa11.19□□□□□ -0.62
LINC00272-201ENST00000367563 PHAXQ9H814 394 aaKnown RBP11.19□□□□□ -0.62
LINC00272-201ENST00000367563 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
LINC00272-201ENST00000367563 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
LINC00272-201ENST00000367563 ZNF609O15014 1411 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 VAMP4O75379 141 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
LINC00272-201ENST00000367563 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
LINC00272-201ENST00000367563 TM4SF4P48230 202 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 SLFN5Q08AF3 891 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 FLIIQ13045 1269 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 PRKG1Q13976 671 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
LINC00272-201ENST00000367563 PKN2Q16513 984 aaKnown RBP11.18□□□□□ -0.62
LINC00272-201ENST00000367563 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 MYD88Q99836 296 aa11.18□□□□□ -0.62
LINC00272-201ENST00000367563 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 SASH1O94885 1247 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 C7P10643 843 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
LINC00272-201ENST00000367563 FKBP5Q13451 457 aaPredicted RBP11.17□□□□□ -0.62
LINC00272-201ENST00000367563 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 PAPPA2Q9BXP8 1791 aa11.17□□□□□ -0.62
LINC00272-201ENST00000367563 XDHP47989 1333 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 ZBED9Q6R2W3 1325 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
LINC00272-201ENST00000367563 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
LINC00272-201ENST00000367563 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
LINC00272-201ENST00000367563 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
LINC00272-201ENST00000367563 POLR2AP24928 1970 aaKnown RBP11.16□□□□□ -0.62
LINC00272-201ENST00000367563 PI4KAP2A4QPH2 592 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 WNT10BO00744 389 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 PDE8AO60658 829 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 FKTNO75072 461 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 PCCAP05165 728 aaPredicted RBP11.15□□□□□ -0.62
LINC00272-201ENST00000367563 PLCG2P16885 1265 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 ATP2B4P23634 1241 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 TXNRD3Q86VQ6 643 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 PI4KAP1Q8N8J0 262 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
LINC00272-201ENST00000367563 CWC25Q9NXE8 425 aaPredicted RBP11.15□□□□□ -0.62
LINC00272-201ENST00000367563 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
LINC00272-201ENST00000367563 KLRK1P26718 216 aa11.14□□□□□ -0.63
LINC00272-201ENST00000367563 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
LINC00272-201ENST00000367563 TRMT2AQ8IZ69 625 aaKnown RBP11.14□□□□□ -0.63
LINC00272-201ENST00000367563 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
LINC00272-201ENST00000367563 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
LINC00272-201ENST00000367563 PTPRCP08575 1304 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 SEC24BO95487 1268 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
LINC00272-201ENST00000367563 LDLRAD1Q5T700 205 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 SPRYD7Q5W111 196 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 G2E3Q7L622 706 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
LINC00272-201ENST00000367563 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 AKAP11Q9UKA4 1901 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
LINC00272-201ENST00000367563 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 PPP1R37O75864 691 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 NF2P35240 595 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 CTSWP56202 376 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 SREBF2Q12772 1141 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
LINC00272-201ENST00000367563 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 CLMNQ96JQ2 1002 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 CFHR5Q9BXR6 569 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 GREM2Q9H772 168 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 ANGEL1Q9UNK9 670 aaKnown RBP11.12□□□□□ -0.63
LINC00272-201ENST00000367563 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 PCDHAC2Q9Y5I4 1007 aa11.12□□□□□ -0.63
LINC00272-201ENST00000367563 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
LINC00272-201ENST00000367563 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00272-201ENST00000367563 IGKV5-2P06315 115 aa11.11□□□□□ -0.63
LINC00272-201ENST00000367563 CCT4P50991 539 aaKnown RBP11.11□□□□□ -0.63
LINC00272-201ENST00000367563 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
LINC00272-201ENST00000367563 OTOP1Q7RTM1 612 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms