RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.86■□□□□ 0.612e-9■■□□□ 13.9
SCAF8-201ENST00000367178 RRP9O43818 475 aaKnown RBP18.86■□□□□ 0.61
SCAF8-201ENST00000367178 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
SCAF8-201ENST00000367178 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
SCAF8-201ENST00000367178 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
SCAF8-201ENST00000367178 SPAG1Q07617 926 aa18.86■□□□□ 0.61
SCAF8-201ENST00000367178 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
SCAF8-201ENST00000367178 CCDC129Q6ZRS4 1044 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 GOLGA6L9A6NEM1 432 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 TNNI2P48788 182 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 ASIC1P78348 528 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 DHX58Q96C10 678 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 UFL1O94874 794 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 ALS2CR12Q96Q35 445 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 AOX1Q06278 1338 aa18.85■□□□□ 0.61
SCAF8-201ENST00000367178 PSMA7O14818 248 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 KRT2P35908 639 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 ZRSR2Q15696 482 aaKnown RBP18.84■□□□□ 0.61
SCAF8-201ENST00000367178 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 APPBP2Q92624 585 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 KIAA0232Q92628 1395 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 MACROD2A1Z1Q3 448 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 RBM26Q5T8P6 1007 aaKnown RBP18.84■□□□□ 0.61
SCAF8-201ENST00000367178 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 TMX1Q9H3N1 280 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 KIAA0754O94854 1291 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 MAP9Q49MG5 647 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 TEX11Q8IYF3 940 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 AKR1B10O60218 316 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 GNA11P29992 359 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 INSRP06213 1382 aa18.84■□□□□ 0.61
SCAF8-201ENST00000367178 RTL1A6NKG5 1358 aa18.83■□□□□ 0.61
SCAF8-201ENST00000367178 DNAJC25Q9H1X3 360 aa18.83■□□□□ 0.61
SCAF8-201ENST00000367178 PLXNC1O60486 1568 aa18.83■□□□□ 0.61
SCAF8-201ENST00000367178 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
SCAF8-201ENST00000367178 SYT1P21579 422 aa18.83■□□□□ 0.6
SCAF8-201ENST00000367178 SNW1Q13573 536 aaKnown RBP18.83■□□□□ 0.6
SCAF8-201ENST00000367178 KRT79Q5XKE5 535 aa18.83■□□□□ 0.6
SCAF8-201ENST00000367178 BICD1Q96G01 975 aa18.83■□□□□ 0.6
SCAF8-201ENST00000367178 TMCO5BA8MYB1 307 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 NOP2P46087 812 aaKnown RBP18.82■□□□□ 0.6
SCAF8-201ENST00000367178 SPAG5Q96R06 1193 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 B4E1Z4 1266 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 ERVV-2B6SEH9 535 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
SCAF8-201ENST00000367178 AOPEPQ8N6M6 819 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 KBTBD3Q8NAB2 608 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
SCAF8-201ENST00000367178 SGSM2O43147 1006 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 LPIN2Q92539 896 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 FAM227BQ96M60 508 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-201ENST00000367178 SLC27A2O14975 620 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 MCM3P25205 808 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-201ENST00000367178 GPAA1O43292 621 aa18.81■□□□□ 0.6
SCAF8-201ENST00000367178 RBM28Q9NW13 759 aaKnown RBP18.81■□□□□ 0.6
SCAF8-201ENST00000367178 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
SCAF8-201ENST00000367178 TAF5LO75529 589 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 GNG11P61952 73 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 MMRN2Q9H8L6 949 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.8■□□□□ 0.64e-7■□□□□ 10.3
SCAF8-201ENST00000367178 GSTTP1A0A1W2PQM5 241 aa18.8■□□□□ 0.6
SCAF8-201ENST00000367178 MCM7P33993 719 aa18.79■□□□□ 0.6
SCAF8-201ENST00000367178 TYRO3Q06418 890 aa18.79■□□□□ 0.6
SCAF8-201ENST00000367178 PHKG2P15735 406 aa18.79■□□□□ 0.6
SCAF8-201ENST00000367178 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
SCAF8-201ENST00000367178 SAP30BPQ9UHR5 308 aaKnown RBP18.79■□□□□ 0.6
SCAF8-201ENST00000367178 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
SCAF8-201ENST00000367178 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
SCAF8-201ENST00000367178 KCNQ3O43525 872 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
SCAF8-201ENST00000367178 CCDC186Q7Z3E2 898 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 USP37Q86T82 979 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 NF2P35240 595 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 PUF60Q9UHX1 559 aaKnown RBP18.78■□□□□ 0.6
SCAF8-201ENST00000367178 SNX14Q9Y5W7 946 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 TCIRG1Q13488 830 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 NAA15Q9BXJ9 866 aaKnown RBP18.78■□□□□ 0.6
SCAF8-201ENST00000367178 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 KDM2BQ8NHM5 1336 aa18.78■□□□□ 0.6
SCAF8-201ENST00000367178 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.6
SCAF8-201ENST00000367178 ANGEL1Q9UNK9 670 aaKnown RBP18.77■□□□□ 0.6
SCAF8-201ENST00000367178 KRT13P13646 458 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 CTNNA2P26232 953 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms