RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 TCP10Q12799 353 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 FLIIQ13045 1269 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CRHR2Q13324 411 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 IFIT5Q13325 482 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 RASA3Q14644 834 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CCDC57Q2TAC2 916 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 SLC4A8Q2Y0W8 1093 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 LRRC24Q50LG9 513 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 STRIP1Q5VSL9 837 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 PRPF38BQ5VTL8 546 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 LDHAL6AQ6ZMR3 332 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ERICH6Q7L0X2 663 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TMC4Q7Z404 712 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CCDC84Q86UT8 332 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 IFNL1Q8IU54 200 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 WWC1Q8IX03 1113 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 AGBL3Q8NEM8 1001 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 SH3TC2Q8TF17 1288 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 DNAAF4Q8WXU2 420 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 DPF3Q92784 378 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZKSCAN4Q969J2 545 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 OPTNQ96CV9 577 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 OTUD5Q96G74 571 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 SUCLG2Q96I99 432 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 WNK4Q96J92 1243 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 FAM84BQ96KN1 310 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ANP32EQ9BTT0 268 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ARHGAP39Q9C0H5 1083 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TMEM39BQ9GZU3 492 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ANKRD2Q9GZV1 360 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 PRKRIP1Q9H875 184 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 MRS2Q9HD23 443 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CNNM1Q9NRU3 951 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 IFT57Q9NWB7 429 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 BABAM1Q9NWV8 329 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 C9orf78Q9NZ63 289 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF70Q9UC06 446 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CPA4Q9UI42 421 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TAOK2Q9UL54 1235 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TTF2Q9UNY4 1162 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 LEMD3Q9Y2U8 911 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 POLR2AP24928 1970 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF831Q5JPB2 1677 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TNRC6CQ9HCJ0 1690 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 TIAM2Q8IVF5 1701 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SPDYE2BA6NHP3 402 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 MANSC4A6NHS7 340 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 BTBD19C9JJ37 291 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 H0YGN5 161 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 MYO1BO43795 1136 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 PEX10O60683 326 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 FMNL1O95466 1100 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 HOXB7P09629 217 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 NBPF7P0C2Y1 421 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SPDYE6P0CI01 402 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CYP2C8P10632 490 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 HSP90B1P14625 803 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CTGFP29279 349 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 HIBADHP31937 336 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 INPP5BP32019 993 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CRKP46108 304 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 IREB2P48200 963 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CASP7P55210 303 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 FKBP1BP68106 108 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 MAP3K9P80192 1104 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 HNRNPUQ00839 825 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SP3Q02447 781 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CALD1Q05682 793 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SREBF2Q12772 1141 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 VGLL4Q14135 290 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 MTFR1Q15390 333 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 TAF1CQ15572 869 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SUPT20HL1Q3ZLR7 823 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 HABP4Q5JVS0 413 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 METTL24Q5JXM2 366 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 MFSD14BQ5SR56 506 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 BEND3Q5T5X7 828 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 LDLRAD1Q5T700 205 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 FBXO46Q6PJ61 603 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 OTOP1Q7RTM1 612 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF804AQ7Z570 1209 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 VPS37DQ86XT2 251 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZFPM1Q8IX07 1006 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 DZIP1LQ8IYY4 767 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 FAM43AQ8N2R8 423 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 LINS1Q8NG48 757 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 TDRD7Q8NHU6 1098 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 BRI3BPQ8WY22 251 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 GCC1Q96CN9 775 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 CDCA7LQ96GN5 454 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 KAZALD1Q96I82 304 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 TMEM106CQ9BVX2 250 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SIL1Q9H173 461 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 BICC1Q9H694 974 aaKnown RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 EFCC1Q9HA90 598 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 USP40Q9NVE5 1235 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 SAGE1Q9NXZ1 904 aa1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.94□□□□□ -2.1
RNU1-42P-201ENST00000364033 BIN2Q9UBW5 565 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms