RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TBC1D16Q8TBP0 767 aa25.1■■□□□ 1.61
SHISA4-201ENST00000362011 RILPL2Q969X0 211 aa25.1■■□□□ 1.61
SHISA4-201ENST00000362011 HAUS7Q99871 368 aa25.1■■□□□ 1.61
SHISA4-201ENST00000362011 IRS2Q9Y4H2 1338 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 MED23Q9ULK4 1368 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 C6orf229H3BNL8 230 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 GYG1P46976 350 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 BCAMP50895 628 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 GNL3LQ9NVN8 582 aaKnown RBP25.09■■□□□ 1.61
SHISA4-201ENST00000362011 POLLQ9UGP5 575 aa25.09■■□□□ 1.61
SHISA4-201ENST00000362011 PASKQ96RG2 1323 aa25.08■■□□□ 1.61
SHISA4-201ENST00000362011 SNED1Q8TER0 1413 aa25.08■■□□□ 1.61
SHISA4-201ENST00000362011 KLRK1P26718 216 aa25.08■■□□□ 1.6
SHISA4-201ENST00000362011 GRIPAP1Q4V328 841 aa25.08■■□□□ 1.6
SHISA4-201ENST00000362011 CCDC93Q567U6 631 aa25.08■■□□□ 1.6
SHISA4-201ENST00000362011 VPS37DQ86XT2 251 aa25.08■■□□□ 1.6
SHISA4-201ENST00000362011 FAM84BQ96KN1 310 aaPredicted RBP25.08■■□□□ 1.6
SHISA4-201ENST00000362011 DNAJC2Q99543 621 aaKnown RBP25.08■■□□□ 1.6
SHISA4-201ENST00000362011 SCN4AP35499 1836 aa25.07■■□□□ 1.6
SHISA4-201ENST00000362011 HIBADHP31937 336 aaKnown RBP25.07■■□□□ 1.6
SHISA4-201ENST00000362011 FBXO33Q7Z6M2 555 aa25.07■■□□□ 1.6
SHISA4-201ENST00000362011 EVI5LQ96CN4 794 aa25.07■■□□□ 1.6
SHISA4-201ENST00000362011 PSME4Q14997 1843 aa25.06■■□□□ 1.6
SHISA4-201ENST00000362011 IQCA1LA6NCM1 817 aa25.06■■□□□ 1.6
SHISA4-201ENST00000362011 MCAMP43121 646 aa25.06■■□□□ 1.6
SHISA4-201ENST00000362011 FKBP4Q02790 459 aaKnown RBP eCLIP25.06■■□□□ 1.6
SHISA4-201ENST00000362011 SCARF1Q14162 830 aa25.06■■□□□ 1.6
SHISA4-201ENST00000362011 GPR101Q96P66 508 aaPredicted RBP25.06■■□□□ 1.6
SHISA4-201ENST00000362011 TAF1DQ9H5J8 278 aaPredicted RBP25.06■■□□□ 1.6
SHISA4-201ENST00000362011 CDC45O75419 566 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 ZNF804AQ7Z570 1209 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 TXNRD3Q86VQ6 643 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 LDHDQ86WU2 507 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 EYA3Q99504 573 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 PAG1Q9NWQ8 432 aa25.05■■□□□ 1.6
SHISA4-201ENST00000362011 MAST2Q6P0Q8 1798 aa25.04■■□□□ 1.6
SHISA4-201ENST00000362011 C8orf34Q49A92 452 aa25.04■■□□□ 1.6
SHISA4-201ENST00000362011 SUPT20HQ8NEM7 779 aa25.04■■□□□ 1.6
SHISA4-201ENST00000362011 SNRKQ9NRH2 765 aa25.04■■□□□ 1.6
SHISA4-201ENST00000362011 SEMA3EO15041 775 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 ZAP70P43403 619 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 CNTNAP1P78357 1384 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 RASGRF1Q13972 1273 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 RTKN2Q8IZC4 609 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 RTFDC1Q9BY42 306 aaPredicted RBP25.03■■□□□ 1.6
SHISA4-201ENST00000362011 NDUFB9Q9Y6M9 179 aa25.03■■□□□ 1.6
SHISA4-201ENST00000362011 ADAMTSL1Q8N6G6 1762 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 GOLIM4O00461 696 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 ZBTB22O15209 634 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 ITGBL1O95965 494 aaPredicted RBP25.02■■□□□ 1.6
SHISA4-201ENST00000362011 SPATA5Q8NB90 893 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 EDC3Q96F86 508 aaKnown RBP25.02■■□□□ 1.6
SHISA4-201ENST00000362011 HMG20BQ9P0W2 317 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 DENND2AQ9ULE3 1009 aa25.02■■□□□ 1.6
SHISA4-201ENST00000362011 ZNF646O15015 1829 aaPredicted RBP25.02■■□□□ 1.6
SHISA4-201ENST00000362011 ZNF541Q9H0D2 1346 aa25.01■■□□□ 1.59
SHISA4-201ENST00000362011 FSD1Q9BTV5 496 aa25.01■■□□□ 1.59
SHISA4-201ENST00000362011 ZC3H12CQ9C0D7 883 aaKnown RBP25.01■■□□□ 1.59
SHISA4-201ENST00000362011 MKRN1Q9UHC7 482 aaKnown RBP25.01■■□□□ 1.59
SHISA4-201ENST00000362011 IQSEC3Q9UPP2 1182 aaPredicted RBP25.01■■□□□ 1.59
SHISA4-201ENST00000362011 COL1A1P02452 1464 aaPredicted RBP25■■□□□ 1.59
SHISA4-201ENST00000362011 RFX7Q2KHR2 1363 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 RIMBP2O15034 1052 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 FRAT2O75474 233 aaPredicted RBP25■■□□□ 1.59
SHISA4-201ENST00000362011 CAPN15O75808 1086 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 WASHC4Q2M389 1173 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 CASC1Q6TDU7 716 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 PI16Q6UXB8 463 aa25■■□□□ 1.59
SHISA4-201ENST00000362011 ZNF277Q9NRM2 450 aaPredicted RBP25■■□□□ 1.59
SHISA4-201ENST00000362011 PDS5AQ29RF7 1337 aaKnown RBP24.99■■□□□ 1.59
SHISA4-201ENST00000362011 FZD9O00144 591 aa24.99■■□□□ 1.59
SHISA4-201ENST00000362011 TTF1Q15361 905 aaPredicted RBP24.99■■□□□ 1.59
SHISA4-201ENST00000362011 TBC1D9Q6ZT07 1266 aa24.99■■□□□ 1.59
SHISA4-201ENST00000362011 KBTBD3Q8NAB2 608 aa24.99■■□□□ 1.59
SHISA4-201ENST00000362011 SCN9AQ15858 1988 aa24.99■■□□□ 1.59
SHISA4-201ENST00000362011 TDRD7Q8NHU6 1098 aaKnown RBP24.98■■□□□ 1.59
SHISA4-201ENST00000362011 PSMD1Q99460 953 aa24.98■■□□□ 1.59
SHISA4-201ENST00000362011 BACH2Q9BYV9 841 aa24.98■■□□□ 1.59
SHISA4-201ENST00000362011 ANTXR1Q9H6X2 564 aa24.98■■□□□ 1.59
SHISA4-201ENST00000362011 CD209Q9NNX6 404 aa24.98■■□□□ 1.59
SHISA4-201ENST00000362011 HIP1O00291 1037 aa24.97■■□□□ 1.59
SHISA4-201ENST00000362011 CYP2E1P05181 493 aaPredicted RBP24.97■■□□□ 1.59
SHISA4-201ENST00000362011 COA1Q9GZY4 146 aa24.97■■□□□ 1.59
SHISA4-201ENST00000362011 G3V3G9 751 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 IL1R1P14778 569 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 CHMLP26374 656 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 IARSP41252 1262 aaKnown RBP24.96■■□□□ 1.59
SHISA4-201ENST00000362011 DCAF8Q5TAQ9 597 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 TICAM2Q86XR7 235 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 HACL1Q9UJ83 578 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 MYH2Q9UKX2 1941 aa24.96■■□□□ 1.59
SHISA4-201ENST00000362011 DIAPH3Q9NSV4 1193 aa24.95■■□□□ 1.58
SHISA4-201ENST00000362011 TMEM88BA6NKF7 163 aa24.94■■□□□ 1.58
SHISA4-201ENST00000362011 LRRFIP1Q32MZ4 808 aaKnown RBP24.94■■□□□ 1.58
SHISA4-201ENST00000362011 PIH1D3Q9NQM4 214 aaKnown RBP24.94■■□□□ 1.58
SHISA4-201ENST00000362011 FOXN1O15353 648 aa24.93■■□□□ 1.58
SHISA4-201ENST00000362011 EPHX2P34913 555 aa24.93■■□□□ 1.58
SHISA4-201ENST00000362011 KIAA2012Q0VF49 1180 aa24.93■■□□□ 1.58
SHISA4-201ENST00000362011 CHAF1AQ13111 956 aaPredicted RBP24.93■■□□□ 1.58
SHISA4-201ENST00000362011 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms