RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ZSCAN31Q96LW9 406 aaPredicted RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 HAUS7Q99871 368 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 RXRAP19793 462 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 GJD4Q96KN9 370 aaPredicted RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 PRIMPOLQ96LW4 560 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 PDE8BO95263 885 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 RUFY3Q7L099 469 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 ATG9AQ7Z3C6 839 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 CNBD1Q8NA66 436 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 RGPD5Q99666 1765 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 APBA3O96018 575 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 UQCRFS1P1P0C7P4 283 aa10.73□□□□□ -0.69
CALD1-202ENST00000361901 ZNF622Q969S3 477 aaKnown RBP eCLIP10.73□□□□□ -0.69
CALD1-202ENST00000361901 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 GPAA1O43292 621 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 MCM5P33992 734 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 DRC7Q8IY82 874 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 JCADQ9P266 1359 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 RFX5P48382 616 aaPredicted RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 AKAP17AQ02040 695 aaKnown RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 SCARF1Q14162 830 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 TTF1Q15361 905 aaPredicted RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 RABL6Q3YEC7 729 aaPredicted RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 FAM173BQ6P4H8 233 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 MYRIPQ8NFW9 859 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 LPIN2Q92539 896 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 ARMT1Q9H993 441 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 STX6O43752 255 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 CHRNDQ07001 517 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
CALD1-202ENST00000361901 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
CALD1-202ENST00000361901 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 RANBP6O60518 1105 aaKnown RBP10.71□□□□□ -0.69
CALD1-202ENST00000361901 MBD4O95243 580 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 AXDND1Q5T1B0 1012 aaPredicted RBP10.71□□□□□ -0.69
CALD1-202ENST00000361901 LINC00116Q8NCU8 138 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
CALD1-202ENST00000361901 NCOA5Q9HCD5 579 aaKnown RBP10.71□□□□□ -0.69
CALD1-202ENST00000361901 ERVV-1B6SEH8 477 aa10.71□□□□□ -0.7
CALD1-202ENST00000361901 PDCP20941 246 aa10.71□□□□□ -0.7
CALD1-202ENST00000361901 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.7
CALD1-202ENST00000361901 VPS72Q15906 364 aa10.71□□□□□ -0.7
CALD1-202ENST00000361901 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.7
CALD1-202ENST00000361901 GOLGA8BA8MQT2 603 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 RPS8P62241 208 aaKnown RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 HS1BP3Q53T59 392 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 SH2B1Q9NRF2 756 aaPredicted RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 ZFYP08048 801 aaPredicted RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 TRIM29Q14134 588 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 TEX35Q5T0J7 233 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 IFIT3O14879 490 aaKnown RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 DHX16O60231 1041 aaKnown RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 GTF2F1P35269 517 aaKnown RBP eCLIP10.7□□□□□ -0.7
CALD1-202ENST00000361901 SART3Q15020 963 aaKnown RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 INTS5Q6P9B9 1019 aaKnown RBP10.7□□□□□ -0.7
CALD1-202ENST00000361901 KRT27Q7Z3Y8 459 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 OSBP2Q969R2 916 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 UBN2Q6ZU65 1347 aa10.7□□□□□ -0.7
CALD1-202ENST00000361901 KLF18A0A0U1RQI7 1052 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 ZNF500O60304 480 aaPredicted RBP10.69□□□□□ -0.7
CALD1-202ENST00000361901 HSPD1P10809 573 aaKnown RBP10.69□□□□□ -0.7
CALD1-202ENST00000361901 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
CALD1-202ENST00000361901 MAP4K1Q92918 833 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 PPP1R9BQ96SB3 815 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 UBAC1Q9BSL1 405 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 UTYO14607 1347 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 CYP21A2P08686 494 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 RBM5P52756 815 aaKnown RBP eCLIP10.69□□□□□ -0.7
CALD1-202ENST00000361901 ST5P78524 1137 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 ME3Q16798 604 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 AMOTL1Q8IY63 956 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 APPBP2Q92624 585 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 GPR101Q96P66 508 aaPredicted RBP10.69□□□□□ -0.7
CALD1-202ENST00000361901 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 COL15A1P39059 1388 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 PXDNLA1KZ92 1463 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 SYCE3A1L190 88 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 LARGE1O95461 756 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 SYT1P21579 422 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 MCAMP43121 646 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 USP5P45974 858 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 NAA16Q6N069 864 aaPredicted RBP10.69□□□□□ -0.7
CALD1-202ENST00000361901 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms