RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
HIPK1-202ENST00000361587 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
HIPK1-202ENST00000361587 CROCCP2Q86T23 111 aa11.97□□□□□ -0.49
HIPK1-202ENST00000361587 RSRC1Q96IZ7 334 aaKnown RBP11.97□□□□□ -0.49
HIPK1-202ENST00000361587 VPS18Q9P253 973 aa11.97□□□□□ -0.49
HIPK1-202ENST00000361587 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
HIPK1-202ENST00000361587 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 MAGEB6P1A0A0J9YX57 407 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 CCDC160A6NGH7 325 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 SPDYE3A6NKU9 549 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 CFAP58Q5T655 872 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 IQUBQ8NA54 791 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 IFT74Q96LB3 600 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 CCDC114Q96M63 670 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 RNF113AO15541 343 aaKnown RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 MARCKSP29966 332 aaPredicted RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 RFC4P35249 363 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 ZNF569Q5MCW4 686 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 NBPF6Q5VWK0 638 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 NBPF4Q96M43 638 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
HIPK1-202ENST00000361587 TRIM7Q9C029 511 aa11.96□□□□□ -0.49
HIPK1-202ENST00000361587 SEPT6Q14141 434 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 APBB1IPQ7Z5R6 666 aaPredicted RBP11.96□□□□□ -0.5
HIPK1-202ENST00000361587 SKAP1Q86WV1 359 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 GPR161Q8N6U8 529 aaKnown RBP11.96□□□□□ -0.5
HIPK1-202ENST00000361587 RGS22Q8NE09 1264 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 PSMD1Q99460 953 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 ELP1O95163 1332 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 ARL1P40616 181 aaPredicted RBP11.96□□□□□ -0.5
HIPK1-202ENST00000361587 PPP1R7Q15435 360 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 B4GALNT4Q76KP1 1039 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 SWAP70Q9UH65 585 aa11.96□□□□□ -0.5
HIPK1-202ENST00000361587 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 ZNF354CQ86Y25 554 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 MEIS3Q99687 375 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 GUCA1BQ9UMX6 200 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 CIB2O75838 187 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 NKIRAS1Q9NYS0 192 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 ZWINTO95229 277 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 PSMC4P43686 418 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 PLCB3Q01970 1234 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 PUS7Q96PZ0 661 aaKnown RBP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 NUP160Q12769 1436 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 GIGYF1O75420 1035 aaPredicted RBP11.95□□□□□ -0.5
HIPK1-202ENST00000361587 MYL5Q02045 173 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 SLC9C2Q5TAH2 1124 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 DTHD1Q6ZMT9 781 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
HIPK1-202ENST00000361587 AKR1B15C9JRZ8 316 aaPredicted RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 TPD52P55327 224 aaPredicted RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 CFAP157Q5JU67 520 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 SNX16P57768 344 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 DHX32Q7L7V1 743 aaKnown RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 GMNNO75496 209 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 CLUL1Q15846 466 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 SEC62Q99442 399 aaKnown RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 IFNKQ9P0W0 207 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 DISP3Q9P2K9 1392 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 FOXO3O43524 673 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 GAS8O95995 478 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
HIPK1-202ENST00000361587 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 CAPZA3Q96KX2 299 aa11.94□□□□□ -0.5
HIPK1-202ENST00000361587 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 BAG1Q99933 345 aaPredicted RBP11.93□□□□□ -0.5
HIPK1-202ENST00000361587 ODF2LQ9ULJ1 636 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
HIPK1-202ENST00000361587 PLCD1P51178 756 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 STMN2Q93045 179 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 LRRC2Q9BYS8 371 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
HIPK1-202ENST00000361587 TRMT1LQ7Z2T5 733 aaKnown RBP11.93□□□□□ -0.5
HIPK1-202ENST00000361587 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
HIPK1-202ENST00000361587 ACEP12821 1306 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms