RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 CCDC136Q96JN2 1154 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 SMARCA5O60264 1052 aaPredicted RBP16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 GTF2IP78347 998 aa16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 ZGPATQ8N5A5 531 aaKnown RBP16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 SALL1Q9NSC2 1324 aa16.92■□□□□ 0.3
NSMCE1-201ENST00000361439 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
NSMCE1-201ENST00000361439 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
NSMCE1-201ENST00000361439 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
NSMCE1-201ENST00000361439 ATP5JP18859 108 aa16.9■□□□□ 0.3
NSMCE1-201ENST00000361439 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
NSMCE1-201ENST00000361439 SPATA5Q8NB90 893 aa16.9■□□□□ 0.3
NSMCE1-201ENST00000361439 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
NSMCE1-201ENST00000361439 PSME4Q14997 1843 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 ERC2O15083 957 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 DDNO94850 711 aaPredicted RBP16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 GMLQ99445 158 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
NSMCE1-201ENST00000361439 MX1P20591 662 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 YY1P25490 414 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 MCAMP43121 646 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 SPTY2D1Q68D10 685 aaPredicted RBP16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 B4GALNT3Q6L9W6 998 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 HMG20BQ9P0W2 317 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 SALL3Q9BXA9 1300 aa16.88■□□□□ 0.29
NSMCE1-201ENST00000361439 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 MRIQ9BWK5 157 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 MAST3O60307 1309 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 AOX1Q06278 1338 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
NSMCE1-201ENST00000361439 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 SCNN1DP51172 638 aa16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 ZNF280AP59817 542 aaPredicted RBP16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 HDLBPQ00341 1268 aaKnown RBP16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
NSMCE1-201ENST00000361439 H7C1D1 291 aa16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 VEGFAP15692 232 aaPredicted RBP16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 CERS5Q8N5B7 392 aa16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 HAUS7Q99871 368 aa16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 CNOT7Q9UIV1 285 aaKnown RBP16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
NSMCE1-201ENST00000361439 PDE1AP54750 535 aa16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 SCARF1Q14162 830 aa16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 GPBP1L1Q9HC44 474 aaPredicted RBP16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 ADARB2Q9NS39 739 aaKnown RBP16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 SCN4AP35499 1836 aa16.84■□□□□ 0.29
NSMCE1-201ENST00000361439 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 TICAM2Q86XR7 235 aa16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 SLF2Q8IX21 1173 aa16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 MTMR14Q8NCE2 650 aa16.83■□□□□ 0.28
NSMCE1-201ENST00000361439 MYH13Q9UKX3 1938 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 POTECB2RU33 542 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 ZAP70P43403 619 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 KIAA0825Q8IV33 1275 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 PLEKHM2Q8IWE5 1019 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 PI4K2BQ8TCG2 481 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 MXD3Q9BW11 206 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 BOLA2Q9H3K6 86 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 JAG2Q9Y219 1238 aa16.82■□□□□ 0.28
NSMCE1-201ENST00000361439 AKAP11Q9UKA4 1901 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 EPHX2P34913 555 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 EPS15P42566 896 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms