RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 NIP7Q9Y221 180 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHD1L-201ENST00000361293 MROH5Q6ZUA9 1318 aa23.67■■□□□ 1.38
CHD1L-201ENST00000361293 BARGINQ6ZT62 677 aa23.67■■□□□ 1.38
CHD1L-201ENST00000361293 ARAP2Q8WZ64 1704 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 H3BQV1 296 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 NTSR2O95665 410 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 IFFO2Q5TF58 517 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 AK7Q96M32 723 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 DENND2AQ9ULE3 1009 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 SALL1Q9NSC2 1324 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 COL4A1P02462 1669 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 LIG1P18858 919 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 MB21D2Q8IYB1 491 aaPredicted RBP23.66■■□□□ 1.38
CHD1L-201ENST00000361293 LEO1Q8WVC0 666 aaPredicted RBP23.66■■□□□ 1.38
CHD1L-201ENST00000361293 SPATA32Q96LK8 384 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 NBPF3Q9H094 633 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 ZNF532Q9HCE3 1301 aa23.66■■□□□ 1.38
CHD1L-201ENST00000361293 KCNQ4P56696 695 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 NKX2-3Q8TAU0 364 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 ZNF274Q96GC6 653 aaPredicted RBP23.65■■□□□ 1.38
CHD1L-201ENST00000361293 ATRNO75882 1429 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 PDE6AP16499 860 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 ANTXR2P58335 489 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 TTF1Q15361 905 aaPredicted RBP23.65■■□□□ 1.38
CHD1L-201ENST00000361293 MPHOSPH8Q99549 860 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 FUCA2Q9BTY2 467 aa23.65■■□□□ 1.38
CHD1L-201ENST00000361293 SCAND2PQ9GZW5 306 aaPredicted RBP23.65■■□□□ 1.38
CHD1L-201ENST00000361293 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.38
CHD1L-201ENST00000361293 LETM1O95202 739 aaPredicted RBP23.64■■□□□ 1.37
CHD1L-201ENST00000361293 RASGRF1Q13972 1273 aa23.64■■□□□ 1.37
CHD1L-201ENST00000361293 FAM98CQ17RN3 349 aaKnown RBP23.64■■□□□ 1.37
CHD1L-201ENST00000361293 TCRBV5S4A2TA0A5A2 114 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 ZNF213O14771 459 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 PRC1O43663 620 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 PARP10Q53GL7 1025 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 ZSCAN25Q6NSZ9 544 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 FBXL16Q8N461 479 aa23.63■■□□□ 1.37
CHD1L-201ENST00000361293 UQCRFS1P1P0C7P4 283 aa23.62■■□□□ 1.37
CHD1L-201ENST00000361293 EVCP57679 992 aa23.62■■□□□ 1.37
CHD1L-201ENST00000361293 UBE3CQ15386 1083 aa23.62■■□□□ 1.37
CHD1L-201ENST00000361293 HMGN5P82970 282 aaKnown RBP23.62■■□□□ 1.37
CHD1L-201ENST00000361293 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
CHD1L-201ENST00000361293 SLC5A1P13866 664 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 RAB11FIP4Q86YS3 637 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 TBC1D10CQ8IV04 446 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 SPATA5Q8NB90 893 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 PGBD1Q96JS3 809 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 FDPSP14324 419 aaKnown RBP23.61■■□□□ 1.37
CHD1L-201ENST00000361293 MCM5P33992 734 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 CCDC152Q4G0S7 254 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 SMIM5Q71RC9 77 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 ZSCAN30Q86W11 494 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 NCOA7Q8NI08 942 aa23.61■■□□□ 1.37
CHD1L-201ENST00000361293 GUCY1B3Q02153 619 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 PTF1AQ7RTS3 328 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 LINC00116Q8NCU8 138 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 FTOQ9C0B1 505 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHD1L-201ENST00000361293 ADD1P35611 737 aaKnown RBP23.6■■□□□ 1.37
CHD1L-201ENST00000361293 CAMK4Q16566 473 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 NAA16Q6N069 864 aaPredicted RBP23.6■■□□□ 1.37
CHD1L-201ENST00000361293 ZSCAN16Q9H4T2 348 aaPredicted RBP23.6■■□□□ 1.37
CHD1L-201ENST00000361293 HPS5Q9UPZ3 1129 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 CARMIL3Q8ND23 1372 aa23.6■■□□□ 1.37
CHD1L-201ENST00000361293 MYH15Q9Y2K3 1946 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 APPP05067 770 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 RALYLQ86SE5 291 aaKnown RBP23.59■■□□□ 1.37
CHD1L-201ENST00000361293 LAMB2P55268 1798 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 KLF18A0A0U1RQI7 1052 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 BCAMP50895 628 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 CEBPZQ03701 1054 aaKnown RBP23.59■■□□□ 1.37
CHD1L-201ENST00000361293 DACT1Q9NYF0 836 aa23.59■■□□□ 1.37
CHD1L-201ENST00000361293 BCORQ6W2J9 1755 aa23.58■■□□□ 1.37
CHD1L-201ENST00000361293 DOCK2Q92608 1830 aa23.58■■□□□ 1.37
CHD1L-201ENST00000361293 C3orf67Q6ZVT6 689 aa23.58■■□□□ 1.37
CHD1L-201ENST00000361293 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.37
CHD1L-201ENST00000361293 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.58■■□□□ 1.37
CHD1L-201ENST00000361293 USP25Q9UHP3 1055 aa23.58■■□□□ 1.37
CHD1L-201ENST00000361293 GOLGA8BA8MQT2 603 aa23.57■■□□□ 1.36
CHD1L-201ENST00000361293 MAGEB6Q8N7X4 407 aa23.57■■□□□ 1.36
CHD1L-201ENST00000361293 STRBPQ96SI9 672 aaKnown RBP23.57■■□□□ 1.36
CHD1L-201ENST00000361293 GOLGA6L4A6NEF3 574 aa23.57■■□□□ 1.36
CHD1L-201ENST00000361293 IGHMBP2P38935 993 aaKnown RBP23.57■■□□□ 1.36
CHD1L-201ENST00000361293 HS1BP3Q53T59 392 aa23.57■■□□□ 1.36
CHD1L-201ENST00000361293 NUP62CLQ9H1M0 184 aa23.57■■□□□ 1.36
CHD1L-201ENST00000361293 TAF1P21675 1872 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 RTL9Q8NET4 1388 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 CHRNDQ07001 517 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
CHD1L-201ENST00000361293 AIDAQ96BJ3 306 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 WTIPA6NIX2 430 aaPredicted RBP23.56■■□□□ 1.36
CHD1L-201ENST00000361293 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
CHD1L-201ENST00000361293 EPB41L4AQ9HCS5 686 aaPredicted RBP23.56■■□□□ 1.36
CHD1L-201ENST00000361293 NR1I2O75469 434 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 ERFEQ4G0M1 354 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 INCENPQ9NQS7 918 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 KIF3AQ9Y496 699 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 MBD4O95243 580 aa23.55■■□□□ 1.36
CHD1L-201ENST00000361293 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms