RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 AMPHP49418 695 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 TTC22Q5TAA0 569 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 NIF3L1Q9GZT8 377 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 GPSM3Q9Y4H4 160 aa8.98□□□□□ -0.97
CLCN3-202ENST00000360642 KCNA6P17658 529 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 HOXC9P31274 260 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 EHHADHQ08426 723 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 USP4Q13107 963 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 PI16Q6UXB8 463 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 C16orf71Q8IYS4 520 aaPredicted RBP8.97□□□□□ -0.97
CLCN3-202ENST00000360642 CAPN10Q9HC96 672 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
CLCN3-202ENST00000360642 SH3BP2P78314 561 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLCN3-202ENST00000360642 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 G2E3Q7L622 706 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
CLCN3-202ENST00000360642 PTPN5P54829 565 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 ORC1Q13415 861 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 KCTD15Q96SI1 283 aaPredicted RBP8.97□□□□□ -0.97
CLCN3-202ENST00000360642 VTI1BQ9UEU0 232 aa8.97□□□□□ -0.97
CLCN3-202ENST00000360642 EIF5BO60841 1220 aaKnown RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 CD2BP2O95400 341 aaKnown RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 CCT4P50991 539 aaKnown RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 COX20Q5RI15 118 aa8.96□□□□□ -0.97
CLCN3-202ENST00000360642 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.97
CLCN3-202ENST00000360642 MTRQ99707 1265 aa8.96□□□□□ -0.97
CLCN3-202ENST00000360642 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.97
CLCN3-202ENST00000360642 EGFL7Q9UHF1 273 aa8.96□□□□□ -0.97
CLCN3-202ENST00000360642 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
CLCN3-202ENST00000360642 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
CLCN3-202ENST00000360642 ETNK1Q9HBU6 452 aa8.96□□□□□ -0.98
CLCN3-202ENST00000360642 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 HRO43593 1189 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 OTUD7AQ8TE49 926 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-202ENST00000360642 BABAM1Q9NWV8 329 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-202ENST00000360642 TREHO43280 583 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 FZD6O60353 706 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 ZPR1O75312 459 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
CLCN3-202ENST00000360642 USP20Q9Y2K6 914 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 FAM208AQ9UK61 1670 aaKnown RBP8.95□□□□□ -0.98
CLCN3-202ENST00000360642 IGHA2P01877 340 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 FSHRP23945 695 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 MSS51Q4VC12 460 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 IL17REQ8NFR9 667 aa8.95□□□□□ -0.98
CLCN3-202ENST00000360642 K7ELQ4 463 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-202ENST00000360642 GDF10P55107 478 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 FANCCQ00597 558 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 USP26Q9BXU7 913 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 SDSP20132 328 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 ZNF687Q8N1G0 1237 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 ABTB2Q8N961 1025 aa8.94□□□□□ -0.98
CLCN3-202ENST00000360642 PPP1R12BO60237 982 aaPredicted RBP8.93□□□□□ -0.98
CLCN3-202ENST00000360642 HMMRO75330 724 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 RAB3GAP1Q15042 981 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 ARMC2Q8NEN0 867 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 KLK14Q9P0G3 267 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 MAP3K5Q99683 1374 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 CHD2O14647 1828 aaKnown RBP8.93□□□□□ -0.98
CLCN3-202ENST00000360642 N4BP2Q86UW6 1770 aaPredicted RBP8.93□□□□□ -0.98
CLCN3-202ENST00000360642 FSD2A1L4K1 749 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 HSP90AB1P08238 724 aaKnown RBP8.93□□□□□ -0.98
CLCN3-202ENST00000360642 CCDC30Q5VVM6 783 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 NUTM2GQ5VZR2 741 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 SLC4A10Q6U841 1118 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 TNPO1Q92973 898 aaKnown RBP8.93□□□□□ -0.98
CLCN3-202ENST00000360642 STK31Q9BXU1 1019 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
CLCN3-202ENST00000360642 PNMA6FA0A0J9YX94 578 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 SNPHO15079 494 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 GNAI2P04899 355 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 TAF7Q15545 349 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-202ENST00000360642 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-202ENST00000360642 NFAT5O94916 1531 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 SALL3Q9BXA9 1300 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 CEMIPQ8WUJ3 1361 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 RABEP1Q15276 862 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 VASH1Q7L8A9 365 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-202ENST00000360642 PXDNLA1KZ92 1463 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 SORBS3O60504 671 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 SF3B2Q13435 895 aaKnown RBP8.92□□□□□ -0.98
CLCN3-202ENST00000360642 L1TD1Q5T7N2 865 aaKnown RBP8.92□□□□□ -0.98
CLCN3-202ENST00000360642 C16orf46Q6P387 395 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
CLCN3-202ENST00000360642 LTN1O94822 1766 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 TNFRSF10BO14763 440 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 SCAMP3O14828 347 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms