RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 UTP14AQ9BVJ6 771 aaKnown RBP13.02□□□□□ -0.33
SSU72-202ENST00000359060 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
SSU72-202ENST00000359060 ZKSCAN3Q9BRR0 538 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
SSU72-202ENST00000359060 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 MBD4O95243 580 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 CTSWP56202 376 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 STX1AQ16623 288 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 HOMER1Q86YM7 354 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 MRPS27Q92552 414 aaKnown RBP13.01□□□□□ -0.33
SSU72-202ENST00000359060 GPR108Q9NPR9 543 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
SSU72-202ENST00000359060 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 PFKFB2O60825 505 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
SSU72-202ENST00000359060 XBP1P17861 261 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 PTGS1P23219 599 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 MYL10Q9BUA6 226 aa13.01□□□□□ -0.33
SSU72-202ENST00000359060 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
SSU72-202ENST00000359060 SLC4A8Q2Y0W8 1093 aa13□□□□□ -0.33
SSU72-202ENST00000359060 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
SSU72-202ENST00000359060 CYP7A1P22680 504 aa13□□□□□ -0.33
SSU72-202ENST00000359060 PHKA1P46020 1223 aa13□□□□□ -0.33
SSU72-202ENST00000359060 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
SSU72-202ENST00000359060 C16orf45Q96MC5 204 aaPredicted RBP13□□□□□ -0.33
SSU72-202ENST00000359060 CBX8Q9HC52 389 aa13□□□□□ -0.33
SSU72-202ENST00000359060 SNAP23O00161 211 aa13□□□□□ -0.33
SSU72-202ENST00000359060 SERPINC1P01008 464 aa13□□□□□ -0.33
SSU72-202ENST00000359060 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
SSU72-202ENST00000359060 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
SSU72-202ENST00000359060 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
SSU72-202ENST00000359060 CLSTN2Q9H4D0 955 aa13□□□□□ -0.33
SSU72-202ENST00000359060 ARMT1Q9H993 441 aa13□□□□□ -0.33
SSU72-202ENST00000359060 SPTLC2O15270 562 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 CIAO1O76071 339 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
SSU72-202ENST00000359060 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
SSU72-202ENST00000359060 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
SSU72-202ENST00000359060 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
SSU72-202ENST00000359060 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
SSU72-202ENST00000359060 PDILTQ8N807 584 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 PHKBQ93100 1093 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
SSU72-202ENST00000359060 ZNF609O15014 1411 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 FMN2Q9NZ56 1722 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 SCARF1Q14162 830 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
SSU72-202ENST00000359060 AOPEPQ8N6M6 819 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
SSU72-202ENST00000359060 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
SSU72-202ENST00000359060 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 ANGEL1Q9UNK9 670 aaKnown RBP12.98□□□□□ -0.33
SSU72-202ENST00000359060 A0A087WWV3 80 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 WTAPQ15007 396 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
SSU72-202ENST00000359060 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 LPIN2Q92539 896 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 TRMT1Q9NXH9 659 aaKnown RBP12.97□□□□□ -0.33
SSU72-202ENST00000359060 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 PDE8BO95263 885 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 WASF1Q92558 559 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
SSU72-202ENST00000359060 PDE6AP16499 860 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
SSU72-202ENST00000359060 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
SSU72-202ENST00000359060 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 NFAT5O94916 1531 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 ZPR1O75312 459 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 SYKP43405 635 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
SSU72-202ENST00000359060 MST1RQ04912 1400 aa12.96□□□□□ -0.33
SSU72-202ENST00000359060 CFAP100Q494V2 611 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 SPATA5Q8NB90 893 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 CNNM3Q8NE01 707 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 GJB4Q9NTQ9 266 aa12.96□□□□□ -0.34
SSU72-202ENST00000359060 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 G3V3G9 751 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 MCAMP43121 646 aa12.95□□□□□ -0.34
SSU72-202ENST00000359060 RESTQ13127 1097 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 347.4 ms