RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
APP-205ENST00000358918 FMR1NBQ8N0W7 255 aaPredicted RBP16.66■□□□□ 0.26
APP-205ENST00000358918 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
APP-205ENST00000358918 EFCC1Q9HA90 598 aa16.66■□□□□ 0.26
APP-205ENST00000358918 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
APP-205ENST00000358918 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
APP-205ENST00000358918 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.26
APP-205ENST00000358918 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
APP-205ENST00000358918 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
APP-205ENST00000358918 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
APP-205ENST00000358918 CC2D1AQ6P1N0 951 aaPredicted RBP16.65■□□□□ 0.26
APP-205ENST00000358918 TRIM65Q6PJ69 517 aa16.65■□□□□ 0.26
APP-205ENST00000358918 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
APP-205ENST00000358918 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
APP-205ENST00000358918 PFKFB2O60825 505 aa16.65■□□□□ 0.26
APP-205ENST00000358918 SASH3O75995 380 aa16.65■□□□□ 0.26
APP-205ENST00000358918 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
APP-205ENST00000358918 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
APP-205ENST00000358918 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
APP-205ENST00000358918 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
APP-205ENST00000358918 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
APP-205ENST00000358918 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
APP-205ENST00000358918 SLC52A2Q9HAB3 445 aa16.64■□□□□ 0.25
APP-205ENST00000358918 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
APP-205ENST00000358918 RSPH14Q9UHP6 348 aa16.64■□□□□ 0.25
APP-205ENST00000358918 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
APP-205ENST00000358918 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
APP-205ENST00000358918 ZSCAN12O43309 604 aa16.64■□□□□ 0.25
APP-205ENST00000358918 SASH1O94885 1247 aa16.64■□□□□ 0.25
APP-205ENST00000358918 GOLGA5Q8TBA6 731 aa16.64■□□□□ 0.25
APP-205ENST00000358918 ARFGAP3Q9NP61 516 aa16.64■□□□□ 0.25
APP-205ENST00000358918 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
APP-205ENST00000358918 TLR7Q9NYK1 1049 aaKnown RBP16.64■□□□□ 0.25
APP-205ENST00000358918 PCDHA7Q9UN72 937 aa16.64■□□□□ 0.25
APP-205ENST00000358918 CPDO75976 1380 aa16.64■□□□□ 0.25
APP-205ENST00000358918 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
APP-205ENST00000358918 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
APP-205ENST00000358918 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
APP-205ENST00000358918 CYP27B1O15528 508 aa16.63■□□□□ 0.25
APP-205ENST00000358918 FANCCQ00597 558 aa16.63■□□□□ 0.25
APP-205ENST00000358918 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
APP-205ENST00000358918 CCDC34Q96HJ3 373 aa16.63■□□□□ 0.25
APP-205ENST00000358918 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
APP-205ENST00000358918 A0A1B0GVL5 298 aa16.63■□□□□ 0.25
APP-205ENST00000358918 MYO1CO00159 1063 aa16.63■□□□□ 0.25
APP-205ENST00000358918 NLRP12P59046 1061 aa16.63■□□□□ 0.25
APP-205ENST00000358918 GNL2Q13823 731 aaKnown RBP16.63■□□□□ 0.25
APP-205ENST00000358918 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
APP-205ENST00000358918 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
APP-205ENST00000358918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.253e-9■■□□□ 12.7
APP-205ENST00000358918 NDUFA8P51970 172 aa16.62■□□□□ 0.25
APP-205ENST00000358918 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
APP-205ENST00000358918 C10orf67Q8IYJ2 551 aa16.62■□□□□ 0.25
APP-205ENST00000358918 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
APP-205ENST00000358918 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
APP-205ENST00000358918 SIL1Q9H173 461 aa16.62■□□□□ 0.25
APP-205ENST00000358918 PSD3Q9NYI0 1048 aa16.62■□□□□ 0.25
APP-205ENST00000358918 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
APP-205ENST00000358918 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
APP-205ENST00000358918 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
APP-205ENST00000358918 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
APP-205ENST00000358918 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
APP-205ENST00000358918 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
APP-205ENST00000358918 FBXO18Q8NFZ0 1043 aa16.62■□□□□ 0.25
APP-205ENST00000358918 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
APP-205ENST00000358918 BIN1O00499 593 aa16.61■□□□□ 0.25
APP-205ENST00000358918 CASQ1P31415 396 aa16.61■□□□□ 0.25
APP-205ENST00000358918 NCAPHQ15003 741 aa16.61■□□□□ 0.25
APP-205ENST00000358918 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
APP-205ENST00000358918 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
APP-205ENST00000358918 RTEL1Q9NZ71 1219 aa16.61■□□□□ 0.25
APP-205ENST00000358918 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
APP-205ENST00000358918 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
APP-205ENST00000358918 LMAN1P49257 510 aa16.6■□□□□ 0.25
APP-205ENST00000358918 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
APP-205ENST00000358918 AIMP1Q12904 312 aaKnown RBP16.6■□□□□ 0.25
APP-205ENST00000358918 EPC1Q9H2F5 836 aa16.6■□□□□ 0.25
APP-205ENST00000358918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.6■□□□□ 0.25
APP-205ENST00000358918 ABCC6O95255 1503 aa16.6■□□□□ 0.25
APP-205ENST00000358918 IKBKBO14920 756 aa16.6■□□□□ 0.25
APP-205ENST00000358918 FANCGO15287 622 aa16.6■□□□□ 0.25
APP-205ENST00000358918 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
APP-205ENST00000358918 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
APP-205ENST00000358918 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
APP-205ENST00000358918 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
APP-205ENST00000358918 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
APP-205ENST00000358918 TMX1Q9H3N1 280 aa16.6■□□□□ 0.25
APP-205ENST00000358918 CYP21A2P08686 494 aa16.59■□□□□ 0.25
APP-205ENST00000358918 STK38Q15208 465 aa16.59■□□□□ 0.25
APP-205ENST00000358918 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
APP-205ENST00000358918 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
APP-205ENST00000358918 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
APP-205ENST00000358918 GOLGA6L9A6NEM1 432 aa16.59■□□□□ 0.25
APP-205ENST00000358918 TRIM66O15016 1216 aa16.59■□□□□ 0.25
APP-205ENST00000358918 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
APP-205ENST00000358918 SRLQ86TD4 932 aa16.59■□□□□ 0.25
APP-205ENST00000358918 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
APP-205ENST00000358918 RABGGTAQ92696 567 aa16.59■□□□□ 0.25
APP-205ENST00000358918 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
APP-205ENST00000358918 LCMT1Q9UIC8 334 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms