RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 GBP1P32455 592 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 THEMISQ8N1K5 641 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-202ENST00000358392 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
COL11A1-202ENST00000358392 HMG20BQ9P0W2 317 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 NAIPQ13075 1403 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 SEL1L2Q5TEA6 688 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 PLEKHA4Q9H4M7 779 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 CASQ2O14958 399 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-202ENST00000358392 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
COL11A1-202ENST00000358392 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
COL11A1-202ENST00000358392 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 CCDC14Q49A88 953 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-202ENST00000358392 KRT23Q9C075 422 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 CADPSQ9ULU8 1353 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 F13A1P00488 732 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
COL11A1-202ENST00000358392 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-202ENST00000358392 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 KRT2P35908 639 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 EVCP57679 992 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 CDC5LQ99459 802 aaKnown RBP12.59□□□□□ -0.39
COL11A1-202ENST00000358392 ZKSCAN5Q9Y2L8 839 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL11A1-202ENST00000358392 PTPRCP08575 1304 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 CLCN1P35523 988 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 DIXDC1Q155Q3 683 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-202ENST00000358392 CACNA2D3Q8IZS8 1091 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 TAF12Q16514 161 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 INF2Q27J81 1249 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-202ENST00000358392 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 FYB2Q5VWT5 728 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 KSR1Q8IVT5 923 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
COL11A1-202ENST00000358392 SPTLC2O15270 562 aa12.58□□□□□ -0.39
COL11A1-202ENST00000358392 GAS8O95995 478 aa12.58□□□□□ -0.39
COL11A1-202ENST00000358392 TNNI2P48788 182 aa12.58□□□□□ -0.39
COL11A1-202ENST00000358392 NUF2Q9BZD4 464 aa12.58□□□□□ -0.39
COL11A1-202ENST00000358392 TNNC1P63316 161 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 JAG2Q9Y219 1238 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 CAVIN2O95810 425 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
COL11A1-202ENST00000358392 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 VCX3BQ9H321 246 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 C9orf84Q5VXU9 1444 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 ZKSCAN3Q9BRR0 538 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 OGFRQ9NZT2 677 aa12.58□□□□□ -0.4
COL11A1-202ENST00000358392 LDHCP07864 332 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 STK38LQ9Y2H1 464 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 GABPAQ06546 454 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 CLUL1Q15846 466 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 ESR2Q92731 530 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 RNF34Q969K3 372 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 PSMB7Q99436 277 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 C6orf50Q9HD87 102 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-202ENST00000358392 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 LUC7L2Q9Y383 392 aaKnown RBP12.57□□□□□ -0.4
COL11A1-202ENST00000358392 BICDL2A1A5D9 508 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 SPAG1Q07617 926 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 ANKLE2Q86XL3 938 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 SPDYE3A6NKU9 549 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 SPOPO43791 374 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 MIGA1Q8NAN2 632 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 GSDMBQ8TAX9 411 aa12.57□□□□□ -0.4
COL11A1-202ENST00000358392 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-202ENST00000358392 ITIH3Q06033 890 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 MCUR1Q96AQ8 359 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 IFT74Q96LB3 600 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 VPS16Q9H269 839 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 UTP11Q9Y3A2 253 aaKnown RBP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 GSTO1P78417 241 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 SH2D4BQ5SQS7 431 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 RFC4P35249 363 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms