RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ERC2O15083 957 aa18.61■□□□□ 0.57
TPM1-206ENST00000358278 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
TPM1-206ENST00000358278 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
TPM1-206ENST00000358278 DOCK2Q92608 1830 aa18.61■□□□□ 0.57
TPM1-206ENST00000358278 PDE4AP27815 886 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 MCAMP43121 646 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 PDE1AP54750 535 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 ZNF512BQ96KM6 892 aaPredicted RBP18.6■□□□□ 0.57
TPM1-206ENST00000358278 JAG2Q9Y219 1238 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 RAD17O75943 681 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 ATP5JP18859 108 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 GTF2IP78347 998 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 SCARF1Q14162 830 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 SPATA5Q8NB90 893 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 KCNQ5Q9NR82 932 aa18.6■□□□□ 0.57
TPM1-206ENST00000358278 USP17L3A6NCW0 530 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 USP17L4A6NCW7 530 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 FZD9O00144 591 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 USP17L1Q7RTZ2 530 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
TPM1-206ENST00000358278 GLRX3O76003 335 aaKnown RBP18.58■□□□□ 0.57
TPM1-206ENST00000358278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.58■□□□□ 0.57
TPM1-206ENST00000358278 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.57
TPM1-206ENST00000358278 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.57
TPM1-206ENST00000358278 STAP2Q9UGK3 403 aa18.58■□□□□ 0.57
TPM1-206ENST00000358278 AOX1Q06278 1338 aa18.58■□□□□ 0.56
TPM1-206ENST00000358278 PDS5AQ29RF7 1337 aaKnown RBP18.58■□□□□ 0.56
TPM1-206ENST00000358278 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.56
TPM1-206ENST00000358278 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.56
TPM1-206ENST00000358278 CXCL9Q07325 125 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 TNIP1Q15025 636 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 STRIP1Q5VSL9 837 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 CIAPIN1Q6FI81 312 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 SKAP1Q86WV1 359 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 MYH2Q9UKX2 1941 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 FAM205AQ6ZU69 1335 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 ZNF541Q9H0D2 1346 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 PSMD14O00487 310 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 ZBTB22O15209 634 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 RGS3P49796 1198 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 WDR66Q8TBY9 1149 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 PI4K2BQ8TCG2 481 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 NDUFB9Q9Y6M9 179 aa18.57■□□□□ 0.56
TPM1-206ENST00000358278 ZAP70P43403 619 aa18.56■□□□□ 0.56
TPM1-206ENST00000358278 MFSD14BQ5SR56 506 aa18.56■□□□□ 0.56
TPM1-206ENST00000358278 TBC1D22AQ8WUA7 517 aa18.56■□□□□ 0.56
TPM1-206ENST00000358278 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
TPM1-206ENST00000358278 GJA3Q9Y6H8 435 aa18.56■□□□□ 0.56
TPM1-206ENST00000358278 ZGPATQ8N5A5 531 aaKnown RBP18.55■□□□□ 0.56
TPM1-206ENST00000358278 HAUS7Q99871 368 aa18.55■□□□□ 0.56
TPM1-206ENST00000358278 DACT2Q5SW24 774 aa18.54■□□□□ 0.56
TPM1-206ENST00000358278 PAG1Q9NWQ8 432 aa18.54■□□□□ 0.56
TPM1-206ENST00000358278 ABCF2Q9UG63 623 aa18.54■□□□□ 0.56
TPM1-206ENST00000358278 GOLIM4O00461 696 aa18.54■□□□□ 0.56
TPM1-206ENST00000358278 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
TPM1-206ENST00000358278 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
TPM1-206ENST00000358278 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
TPM1-206ENST00000358278 MYO3BQ8WXR4 1341 aa18.53■□□□□ 0.56
TPM1-206ENST00000358278 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
TPM1-206ENST00000358278 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
TPM1-206ENST00000358278 CYP2E1P05181 493 aaPredicted RBP18.53■□□□□ 0.56
TPM1-206ENST00000358278 TTF1Q15361 905 aaPredicted RBP18.53■□□□□ 0.56
TPM1-206ENST00000358278 DPY19L2Q6NUT2 758 aa18.53■□□□□ 0.56
TPM1-206ENST00000358278 GPC2Q8N158 579 aa18.53■□□□□ 0.56
TPM1-206ENST00000358278 ADAMTSL1Q8N6G6 1762 aa18.52■□□□□ 0.56
TPM1-206ENST00000358278 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.56
TPM1-206ENST00000358278 TBC1D9Q6ZT07 1266 aa18.52■□□□□ 0.56
TPM1-206ENST00000358278 EDC3Q96F86 508 aaKnown RBP18.52■□□□□ 0.56
TPM1-206ENST00000358278 SCN4AP35499 1836 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 TTC22Q5TAA0 569 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.55
TPM1-206ENST00000358278 CERS5Q8N5B7 392 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 LRP2BPQ9P2M1 347 aa18.52■□□□□ 0.55
TPM1-206ENST00000358278 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.55
TPM1-206ENST00000358278 LDHBP07195 334 aaKnown RBP18.51■□□□□ 0.55
TPM1-206ENST00000358278 PRDX5P30044 214 aa18.51■□□□□ 0.55
TPM1-206ENST00000358278 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
TPM1-206ENST00000358278 ECM29Q5VYK3 1845 aa18.5■□□□□ 0.55
TPM1-206ENST00000358278 F8W031 263 aaPredicted RBP18.5■□□□□ 0.55
TPM1-206ENST00000358278 IDH1O75874 414 aaKnown RBP18.5■□□□□ 0.55
TPM1-206ENST00000358278 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
TPM1-206ENST00000358278 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
TPM1-206ENST00000358278 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
TPM1-206ENST00000358278 AGBL3Q8NEM8 1001 aa18.5■□□□□ 0.55
TPM1-206ENST00000358278 PIH1D3Q9NQM4 214 aaKnown RBP18.5■□□□□ 0.55
TPM1-206ENST00000358278 SUGT1Q9Y2Z0 365 aa18.5■□□□□ 0.55
TPM1-206ENST00000358278 GMPSP49915 693 aaPredicted RBP18.49■□□□□ 0.55
TPM1-206ENST00000358278 DZIP1Q86YF9 867 aaKnown RBP18.49■□□□□ 0.55
TPM1-206ENST00000358278 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
TPM1-206ENST00000358278 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
TPM1-206ENST00000358278 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
TPM1-206ENST00000358278 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
TPM1-206ENST00000358278 MAST3O60307 1309 aa18.49■□□□□ 0.55
TPM1-206ENST00000358278 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms