RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PRPF6O94906 941 aaKnown RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SAT1P21673 171 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SFPQP23246 707 aaKnown RBP eCLIP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RAPGEF1Q13905 1077 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RRAGBQ5VZM2 374 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 CARD10Q9BWT7 1032 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 AZI2Q9H6S1 392 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RAB3GAP2Q9H2M9 1393 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 HSF2BPO75031 334 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 APBA3O96018 575 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 WDR44Q5JSH3 913 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 LCA5Q86VQ0 697 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 FAM114A1Q8IWE2 563 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 NEK1Q96PY6 1258 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 EXOC6BQ9Y2D4 811 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 TCP10Q12799 353 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SLC12A1Q13621 1099 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 HP1BP3Q5SSJ5 553 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 GBP7Q8N8V2 638 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC110Q8TBZ0 833 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RMDN2Q96LZ7 410 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 ZSCAN32Q9NX65 697 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 MAGED2Q9UNF1 606 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 ATP2A2P16615 1042 aaKnown RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SETDB1Q15047 1291 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 BRD3Q15059 726 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 NFE2L2Q16236 605 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 PNMA8AQ86V59 439 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC24Q8N4L8 307 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 KIF3CO14782 793 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 SZRD1Q7Z422 152 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 PLVAPQ9BX97 442 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 STK10O94804 968 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 PRR16Q569H4 304 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 RBBP5Q15291 538 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 ANO6Q4KMQ2 910 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 KIAA1841Q6NSI8 718 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 MYLK4Q86YV6 388 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 CDC26Q8NHZ8 85 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 RBM17Q96I25 401 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 PTPRGP23470 1445 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 BICDL2A1A5D9 508 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 SEC24BO95487 1268 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 USH1GQ495M9 461 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 MUM1L1Q5H9M0 696 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 NAA16Q6N069 864 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 TRIM56Q9BRZ2 755 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 TRPC6Q9Y210 931 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.53□□□□□ -1.364e-6■■□□□ 13.9
BRCA1-203ENST00000357654 VIMP08670 466 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 KRT32Q14532 448 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 ZCRB1Q8TBF4 217 aaKnown RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 HAUS2Q9NVX0 235 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 PPP6R1Q9UPN7 881 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 GNPATO15228 680 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 TRAK2O60296 914 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 METAP2P50579 478 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 ASIC1P78348 528 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 AMOTQ4VCS5 1084 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 PALM2Q8IXS6 379 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
BRCA1-203ENST00000357654 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-203ENST00000357654 KRT28Q7Z3Y7 464 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 GPIHBP1Q8IV16 184 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 DCPSQ96C86 337 aaKnown RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 CSADQ9Y600 493 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 YARSP54577 528 aaKnown RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 SF3A3Q12874 501 aaKnown RBP eCLIP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 TMC6Q7Z403 805 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 MIGA1Q8NAN2 632 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 DDX27Q96GQ7 796 aaKnown RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 RAB3IPQ96QF0 476 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 NAIPQ13075 1403 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 KANK4Q5T7N3 995 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 NCAPG2Q86XI2 1143 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 LEO1Q8WVC0 666 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 NUF2Q9BZD4 464 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 PNMA2Q9UL42 364 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 ATAD2BQ9ULI0 1458 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 TLDC2A0PJX2 215 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 AKR1B10O60218 316 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 MBD3O95983 291 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 ARHGEF6Q15052 776 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 ZBTB41Q5SVQ8 909 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 MYSM1Q5VVJ2 828 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 HACE1Q8IYU2 909 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 GDAP1Q8TB36 358 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 DDX12PQ92771 950 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 RTEL1-TNFRSF6BF6WH68 1400 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms