RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NEMFO60524 1076 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 CTDNEP1O95476 244 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 ATP5JP18859 108 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 NDUFA8P51970 172 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCZ1BP86790 482 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCZ1P86791 482 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 RCOR1Q9UKL0 485 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 PCDHA7Q9UN72 937 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF609O15014 1411 aa9.54□□□□□ -0.88
CDC42SE1-201ENST00000357235 CPLX1O14810 134 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 NRDCO43847 1150 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 PFKFB2O60825 505 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 GCP02774 474 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 MARCKSP29966 332 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 TPM4P67936 248 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 PTPN12Q05209 780 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZSCAN26Q16670 478 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 THEMISQ8N1K5 641 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 ERO1AQ96HE7 468 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 DEF6Q9H4E7 631 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 A0A1B0GUL7 405 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 CDC25BP30305 580 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 NOM1Q5C9Z4 860 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 SARM1Q6SZW1 724 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 SYNE3Q6ZMZ3 975 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 LRRN4CLQ8ND94 238 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 E7EWF7 191 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 GOLGA8FQ08AF8 430 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 GOLGA8DPQ0D2H9 430 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 GNL2Q13823 731 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 TSGA10IPQ3SY00 556 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 TTC5Q8N0Z6 440 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 LCMT1Q9UIC8 334 aa9.53□□□□□ -0.88
CDC42SE1-201ENST00000357235 FMN2Q9NZ56 1722 aa9.52□□□□□ -0.88
CDC42SE1-201ENST00000357235 SLC3A2P08195 630 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 PDIA6Q15084 440 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 NAA16Q6N069 864 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 KCNH5Q8NCM2 988 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 LMTK3Q96Q04 1460 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 SERPINC1P01008 464 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 CSB-PGBD3P0DP91 1061 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 GSDMDP57764 484 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 ARHGAP29Q52LW3 1261 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 E4F1Q66K89 784 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 KBTBD3Q8NAB2 608 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 SMARCC2Q8TAQ2 1214 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZNF594Q96JF6 807 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 METTL22Q9BUU2 404 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 ALDH8A1Q9H2A2 487 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
CDC42SE1-201ENST00000357235 URI1O94763 535 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 HSPD1P10809 573 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ATP1A3P13637 1013 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 RXRAP19793 462 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 TTC31Q49AM3 519 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 PPP1R13BQ96KQ4 1090 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 HAUS7Q99871 368 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 KIAA1468Q9P260 1216 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 PXDNQ92626 1479 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 IFIT1P09914 478 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ILDR1Q86SU0 546 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 NBPF11Q86T75 865 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 MNS1Q8NEH6 495 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ENGASEQ8NFI3 743 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ORAI2Q96SN7 254 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 COPRSQ9NQ92 184 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 ORC3Q9UBD5 711 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 DIP2AQ14689 1571 aa9.51□□□□□ -0.89
CDC42SE1-201ENST00000357235 KLF18A0A0U1RQI7 1052 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms