RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PPP1R13BQ96KQ4 1090 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 DLG5Q8TDM6 1919 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 TARSL2A2RTX5 802 aaKnown RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 ZBTB7BO15156 539 aaPredicted RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 FOSBP53539 338 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 TAOK2Q9UL54 1235 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 AIMP1Q12904 312 aaKnown RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 PDE11AQ9HCR9 933 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 CWC27Q6UX04 472 aaKnown RBP7.46□□□□□ -1.21
TRIM38-201ENST00000357085 NAPGQ99747 312 aaPredicted RBP7.46□□□□□ -1.21
TRIM38-201ENST00000357085 TAOK3Q9H2K8 898 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 USP16Q9Y5T5 823 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 WDHD1O75717 1129 aaPredicted RBP7.46□□□□□ -1.21
TRIM38-201ENST00000357085 PAFAH1B1P43034 410 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 HSP90AB2PQ58FF8 381 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 ZFYP08048 801 aaPredicted RBP7.46□□□□□ -1.21
TRIM38-201ENST00000357085 IL17RAQ96F46 866 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.21
TRIM38-201ENST00000357085 NEO1Q92859 1461 aa7.46□□□□□ -1.21
TRIM38-201ENST00000357085 C8orf76Q96K31 380 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 CEP89Q96ST8 783 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 ACTR5Q9H9F9 607 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 RAI14Q9P0K7 980 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 TRIM66O15016 1216 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 ATP8B2P98198 1209 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 SGSM2O43147 1006 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 AMPHP49418 695 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 NBPF14Q5TI25 921 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 PPP1R1BQ9UD71 204 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 ADAM21Q9UKJ8 722 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 CYLC1P35663 651 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 TEFQ10587 303 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 NDC80O14777 642 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 GSPT1P15170 499 aaKnown RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 IBSPP21815 317 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 PPP2R5BQ15173 497 aa7.46□□□□□ -1.22
TRIM38-201ENST00000357085 BAG1Q99933 345 aaPredicted RBP7.46□□□□□ -1.22
TRIM38-201ENST00000357085 UBASH3AP57075 661 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM38-201ENST00000357085 TAF4BQ92750 862 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 ZSWIM4Q9H7M6 989 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 POLKQ9UBT6 870 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 IRX1P78414 480 aaPredicted RBP7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CARD6Q9BX69 1037 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 HYPKQ9NX55 129 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 GOLGA6CA6NDK9 693 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CHD1O14646 1710 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 SEC31AO94979 1220 aaKnown RBP7.45□□□□□ -1.22
TRIM38-201ENST00000357085 GOLGA6DP0CG33 693 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 STK3Q13188 491 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 TSNAXIP1Q2TAA8 658 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 C1orf141Q5JVX7 400 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 FKBP15Q5T1M5 1219 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 IQUBQ8NA54 791 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CACTINQ8WUQ7 758 aaKnown RBP7.45□□□□□ -1.22
TRIM38-201ENST00000357085 GOLGA6AQ9NYA3 693 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 AK2P54819 239 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 APOBRQ0VD83 1088 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CNNM3Q8NE01 707 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 LRRC27Q9C0I9 530 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 RASAL2Q9UJF2 1139 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 GCKP35557 465 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 LIG3P49916 1009 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 PLA2G4DQ86XP0 818 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
TRIM38-201ENST00000357085 WDR66Q8TBY9 1149 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 NACAP1Q9BZK3 213 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 FLT4P35916 1363 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 STAG1Q8WVM7 1258 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 RNF14Q9UBS8 474 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 USH1CQ9Y6N9 552 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 GOLGA6BA6NDN3 693 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 ATP5DP30049 168 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CEP85LQ5SZL2 805 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 CCDC114Q96M63 670 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 ST7Q9NRC1 585 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 IFNKQ9P0W0 207 aa7.45□□□□□ -1.22
TRIM38-201ENST00000357085 NT5C2P49902 561 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 NLRP5P59047 1200 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 FLIIQ13045 1269 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 AMOTQ4VCS5 1084 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 CC2D1AQ6P1N0 951 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 CYP26C1Q6V0L0 522 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 RUFY4Q6ZNE9 571 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 CNOT10Q9H9A5 744 aaKnown RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 PDCD2Q16342 344 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 ALS2CLQ60I27 953 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 C14orf37Q86TY3 774 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 AACSQ86V21 672 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 GBP7Q8N8V2 638 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 MLKLQ8NB16 471 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 LRRC45Q96CN5 670 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 L2HGDHQ9H9P8 463 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms