RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ANKRD45Q5TZF3 282 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 AGBL3Q8NEM8 1001 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 WDR66Q8TBY9 1149 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 CCDC136Q96JN2 1154 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 WDR90Q96KV7 1748 aa19.58■□□□□ 0.72
FDPS-201ENST00000356657 ZNF541Q9H0D2 1346 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 PHKA1P46020 1223 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 NUCB1Q02818 461 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 TTC39AQ5SRH9 613 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
FDPS-201ENST00000356657 L3MBTL3Q96JM7 780 aaPredicted RBP19.57■□□□□ 0.72
FDPS-201ENST00000356657 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
FDPS-201ENST00000356657 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 SUGT1Q9Y2Z0 365 aa19.57■□□□□ 0.72
FDPS-201ENST00000356657 AKAP11Q9UKA4 1901 aa19.56■□□□□ 0.72
FDPS-201ENST00000356657 ZGPATQ8N5A5 531 aaKnown RBP19.56■□□□□ 0.72
FDPS-201ENST00000356657 DPF2Q92785 391 aa19.56■□□□□ 0.72
FDPS-201ENST00000356657 TTC41PQ6P2S7 1318 aa19.56■□□□□ 0.72
FDPS-201ENST00000356657 SALL1Q9NSC2 1324 aa19.56■□□□□ 0.72
FDPS-201ENST00000356657 PSMD14O00487 310 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 RAD17O75943 681 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 GTF2IP78347 998 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 DACT2Q5SW24 774 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 RSBN1LQ6PCB5 846 aaPredicted RBP19.55■□□□□ 0.72
FDPS-201ENST00000356657 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 NMRK2Q9NPI5 230 aa19.55■□□□□ 0.72
FDPS-201ENST00000356657 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
FDPS-201ENST00000356657 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
FDPS-201ENST00000356657 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
FDPS-201ENST00000356657 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
FDPS-201ENST00000356657 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
FDPS-201ENST00000356657 ECHDC1Q9NTX5 307 aa19.54■□□□□ 0.72
FDPS-201ENST00000356657 ERC2O15083 957 aa19.53■□□□□ 0.72
FDPS-201ENST00000356657 MFSD14BQ5SR56 506 aa19.53■□□□□ 0.72
FDPS-201ENST00000356657 TMED8Q6PL24 325 aaPredicted RBP19.53■□□□□ 0.72
FDPS-201ENST00000356657 SPATA5Q8NB90 893 aa19.53■□□□□ 0.72
FDPS-201ENST00000356657 RRAGCQ9HB90 399 aa19.53■□□□□ 0.72
FDPS-201ENST00000356657 GJA3Q9Y6H8 435 aa19.53■□□□□ 0.72
FDPS-201ENST00000356657 MAST3O60307 1309 aa19.52■□□□□ 0.72
FDPS-201ENST00000356657 ATP5JP18859 108 aa19.52■□□□□ 0.72
FDPS-201ENST00000356657 MX1P20591 662 aa19.52■□□□□ 0.72
FDPS-201ENST00000356657 LMOD1P29536 600 aaPredicted RBP19.52■□□□□ 0.72
FDPS-201ENST00000356657 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
FDPS-201ENST00000356657 COL1A1P02452 1464 aaPredicted RBP19.52■□□□□ 0.71
FDPS-201ENST00000356657 AOX1Q06278 1338 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 KIF3CO14782 793 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 DDNO94850 711 aaPredicted RBP19.51■□□□□ 0.71
FDPS-201ENST00000356657 MCAMP43121 646 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 SPTY2D1Q68D10 685 aaPredicted RBP19.51■□□□□ 0.71
FDPS-201ENST00000356657 OGFOD1Q8N543 542 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 FBXW7Q969H0 707 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 GMLQ99445 158 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 KCNQ5Q9NR82 932 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 HMG20BQ9P0W2 317 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 IQSEC3Q9UPP2 1182 aaPredicted RBP19.51■□□□□ 0.71
FDPS-201ENST00000356657 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
FDPS-201ENST00000356657 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
FDPS-201ENST00000356657 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
FDPS-201ENST00000356657 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
FDPS-201ENST00000356657 LNPKQ9C0E8 428 aa19.5■□□□□ 0.71
FDPS-201ENST00000356657 GPRC5DQ9NZD1 345 aa19.5■□□□□ 0.71
FDPS-201ENST00000356657 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
FDPS-201ENST00000356657 HDAC9Q9UKV0 1011 aa19.5■□□□□ 0.71
FDPS-201ENST00000356657 GLRX3O76003 335 aaKnown RBP19.49■□□□□ 0.71
FDPS-201ENST00000356657 GMPSP49915 693 aaPredicted RBP19.49■□□□□ 0.71
FDPS-201ENST00000356657 MAST2Q6P0Q8 1798 aa19.49■□□□□ 0.71
FDPS-201ENST00000356657 DOCK2Q92608 1830 aa19.49■□□□□ 0.71
FDPS-201ENST00000356657 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 SCNN1DP51172 638 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
FDPS-201ENST00000356657 MRIQ9BWK5 157 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 HACL1Q9UJ83 578 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 H7C1D1 291 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
FDPS-201ENST00000356657 CERS5Q8N5B7 392 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
FDPS-201ENST00000356657 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
FDPS-201ENST00000356657 ZNF280AP59817 542 aaPredicted RBP19.47■□□□□ 0.71
FDPS-201ENST00000356657 SCARF1Q14162 830 aa19.47■□□□□ 0.71
FDPS-201ENST00000356657 SLF2Q8IX21 1173 aa19.47■□□□□ 0.71
FDPS-201ENST00000356657 HAUS7Q99871 368 aa19.47■□□□□ 0.71
FDPS-201ENST00000356657 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
FDPS-201ENST00000356657 TOMM70O94826 608 aa19.46■□□□□ 0.71
FDPS-201ENST00000356657 PDE1AP54750 535 aa19.46■□□□□ 0.71
FDPS-201ENST00000356657 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
FDPS-201ENST00000356657 TICAM2Q86XR7 235 aa19.46■□□□□ 0.71
FDPS-201ENST00000356657 ADARB2Q9NS39 739 aaKnown RBP19.46■□□□□ 0.71
FDPS-201ENST00000356657 CNOT7Q9UIV1 285 aaKnown RBP19.46■□□□□ 0.71
FDPS-201ENST00000356657 SERPINA10Q9UK55 444 aa19.46■□□□□ 0.71
FDPS-201ENST00000356657 ZBTB12Q9Y330 459 aaPredicted RBP19.46■□□□□ 0.71
FDPS-201ENST00000356657 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
FDPS-201ENST00000356657 MICALL2Q8IY33 904 aa19.45■□□□□ 0.7
FDPS-201ENST00000356657 MYH7P12883 1935 aa19.45■□□□□ 0.7
FDPS-201ENST00000356657 ECM29Q5VYK3 1845 aa19.45■□□□□ 0.7
FDPS-201ENST00000356657 CYP2E1P05181 493 aaPredicted RBP19.44■□□□□ 0.7
FDPS-201ENST00000356657 ZAP70P43403 619 aa19.44■□□□□ 0.7
FDPS-201ENST00000356657 PI16Q6UXB8 463 aa19.44■□□□□ 0.7
FDPS-201ENST00000356657 USP50Q70EL3 339 aaPredicted RBP19.44■□□□□ 0.7
FDPS-201ENST00000356657 KIAA0825Q8IV33 1275 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms