RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
CCDC25-201ENST00000356537 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
CCDC25-201ENST00000356537 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 APPBP2Q92624 585 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 AK7Q96M32 723 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 ANKRD1Q15327 319 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 NGLY1Q96IV0 654 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 NCOA5Q9HCD5 579 aaKnown RBP11.24□□□□□ -0.61
CCDC25-201ENST00000356537 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 SMARCC2Q8TAQ2 1214 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 LPIN2Q92539 896 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 TIAM2Q8IVF5 1701 aa11.24□□□□□ -0.61
CCDC25-201ENST00000356537 VPS37CA5D8V6 355 aaPredicted RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 FIBPO43427 364 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 PFKFB2O60825 505 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 BCAMP50895 628 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 LARP1BQ659C4 914 aaKnown RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 MB21D2Q8IYB1 491 aaPredicted RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
CCDC25-201ENST00000356537 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 INCENPQ9NQS7 918 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 ZNF532Q9HCE3 1301 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 TTC6Q86TZ1 520 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 TBC1D10CQ8IV04 446 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
CCDC25-201ENST00000356537 PDE6AP16499 860 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
CCDC25-201ENST00000356537 EVCP57679 992 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 CHRNDQ07001 517 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
CCDC25-201ENST00000356537 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 ZFYP08048 801 aaPredicted RBP11.22□□□□□ -0.61
CCDC25-201ENST00000356537 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 SENP2Q9HC62 589 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 UTRNP46939 3433 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 FDPSP14324 419 aaKnown RBP11.22□□□□□ -0.61
CCDC25-201ENST00000356537 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
CCDC25-201ENST00000356537 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
CCDC25-201ENST00000356537 MBD3O95983 291 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
CCDC25-201ENST00000356537 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
CCDC25-201ENST00000356537 SMARCC1Q92922 1105 aaPredicted RBP11.21□□□□□ -0.61
CCDC25-201ENST00000356537 SMIM22K7EJ46 135 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 IDH1O75874 414 aaKnown RBP11.21□□□□□ -0.61
CCDC25-201ENST00000356537 NASPP49321 788 aaPredicted RBP11.21□□□□□ -0.61
CCDC25-201ENST00000356537 RESTQ13127 1097 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 ZNF384Q8TF68 577 aa11.21□□□□□ -0.61
CCDC25-201ENST00000356537 KLRK1P26718 216 aa11.21□□□□□ -0.62
CCDC25-201ENST00000356537 UBE3CQ15386 1083 aa11.21□□□□□ -0.62
CCDC25-201ENST00000356537 CYB5R4Q7L1T6 521 aa11.21□□□□□ -0.62
CCDC25-201ENST00000356537 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.62
CCDC25-201ENST00000356537 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.62
CCDC25-201ENST00000356537 USP21Q9UK80 565 aa11.21□□□□□ -0.62
CCDC25-201ENST00000356537 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
CCDC25-201ENST00000356537 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
CCDC25-201ENST00000356537 UBE2HP62256 183 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 FUCA2Q9BTY2 467 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 ZNF804BA4D1E1 1349 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 NEDD4P46934 1319 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 PPP1R9BQ96SB3 815 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 MPHOSPH8Q99549 860 aa11.2□□□□□ -0.62
CCDC25-201ENST00000356537 FTOQ9C0B1 505 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC25-201ENST00000356537 PTPDC1A2A3K4 754 aa11.19□□□□□ -0.62
CCDC25-201ENST00000356537 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
CCDC25-201ENST00000356537 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
CCDC25-201ENST00000356537 PRKAB2O43741 272 aa11.19□□□□□ -0.62
CCDC25-201ENST00000356537 HSP90B1P14625 803 aaKnown RBP11.19□□□□□ -0.62
CCDC25-201ENST00000356537 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
CCDC25-201ENST00000356537 MAGEB6Q8N7X4 407 aa11.19□□□□□ -0.62
CCDC25-201ENST00000356537 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
CCDC25-201ENST00000356537 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
CCDC25-201ENST00000356537 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 SLC5A1P13866 664 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 TM4SF1P30408 202 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 GYG1P46976 350 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 ZNF274Q96GC6 653 aaPredicted RBP11.18□□□□□ -0.62
CCDC25-201ENST00000356537 PRC1O43663 620 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 UQCRFS1P1P0C7P4 283 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 LIG1P18858 919 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 FOSBP53539 338 aa11.18□□□□□ -0.62
CCDC25-201ENST00000356537 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms