RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 MAP3K2Q9Y2U5 619 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 ATP6V0A2Q9Y487 856 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 ATP5DP30049 168 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 TSNAXIP1Q2TAA8 658 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 RPRD2Q5VT52 1461 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PSMA7O14818 248 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PLS1Q14651 629 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 SEL1L2Q5TEA6 688 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 RASA3Q14644 834 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 WTAPQ15007 396 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 IFIT1BQ5T764 474 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CEP128Q6ZU80 1094 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 ARFGAP2Q8N6H7 521 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PLIN2Q99541 437 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CCT6AP40227 531 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PPANQ9NQ55 473 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CALM1P0DP23 149 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CALM2P0DP24 149 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 CALM3P0DP25 149 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 PDE4BQ07343 736 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 BRF1Q92994 677 aa12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 TACO1Q9BSH4 297 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-201ENST00000356183 FRMD3A2A2Y4 597 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 MCUR1Q96AQ8 359 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 ZNF445P59923 1031 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 BAG1Q99933 345 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 ELF2Q15723 593 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 UTP14CQ5TAP6 766 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 ZPR1O75312 459 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 RAPGEF1Q13905 1077 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 VCXQ9H320 206 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC26Q8TAB7 109 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TRMT112Q9UI30 125 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 AGTPBP1Q9UPW5 1226 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 ERMNQ8TAM6 284 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TPX2Q9ULW0 747 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 E7EVH7 732 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 SDCCAG8Q86SQ7 713 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 ZBTB43O43298 467 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TUBB4BP68371 445 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 RTN1Q16799 776 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC14Q49A88 953 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TACC3Q9Y6A5 838 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 MAP2K2P36507 400 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 ERO1AQ96HE7 468 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TCHPQ9BT92 498 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 SDSP20132 328 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 ERCC6LQ2NKX8 1250 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 PRR16Q569H4 304 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 DCAF17Q5H9S7 520 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-201ENST00000356183 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 GCKP35557 465 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 C17orf53Q8N3J3 647 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 GPTP24298 496 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 GBP5Q96PP8 586 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 KRT5P13647 590 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 SPAG1Q07617 926 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 MAP7Q14244 749 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
GTF3C1-201ENST00000356183 CHST3Q7LGC8 479 aa12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 MGARPQ8TDB4 240 aa12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
GTF3C1-201ENST00000356183 KDM2BQ8NHM5 1336 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 KRT9P35527 623 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 BICDL2A1A5D9 508 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 SH2D4BQ5SQS7 431 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms