RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 CTNNA3Q9UI47 895 aa21.13■□□□□ 0.97
PDZD3-202ENST00000355547 BECN2A8MW95 431 aa21.13■□□□□ 0.97
PDZD3-202ENST00000355547 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
PDZD3-202ENST00000355547 CHST3Q7LGC8 479 aa21.13■□□□□ 0.97
PDZD3-202ENST00000355547 MRPS27Q92552 414 aaKnown RBP21.13■□□□□ 0.97
PDZD3-202ENST00000355547 CPDO75976 1380 aa21.13■□□□□ 0.97
PDZD3-202ENST00000355547 FOXP2O15409 715 aa21.12■□□□□ 0.97
PDZD3-202ENST00000355547 GUCY1B3Q02153 619 aa21.12■□□□□ 0.97
PDZD3-202ENST00000355547 CEP57L1Q8IYX8 460 aa21.12■□□□□ 0.97
PDZD3-202ENST00000355547 TPD52L1Q16890 204 aaPredicted RBP21.12■□□□□ 0.97
PDZD3-202ENST00000355547 PUS3Q9BZE2 481 aaKnown RBP21.12■□□□□ 0.97
PDZD3-202ENST00000355547 CEP126Q9P2H0 1117 aa21.12■□□□□ 0.97
PDZD3-202ENST00000355547 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
PDZD3-202ENST00000355547 A1BGP04217 495 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 ZFYP08048 801 aaPredicted RBP21.11■□□□□ 0.97
PDZD3-202ENST00000355547 NCBP1Q09161 790 aaKnown RBP21.11■□□□□ 0.97
PDZD3-202ENST00000355547 ATP2B3Q16720 1220 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 LINC00301Q8NCQ3 95 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 FBXO3Q9UK99 471 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 ERVV-2B6SEH9 535 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 NAT10Q9H0A0 1025 aaKnown RBP21.11■□□□□ 0.97
PDZD3-202ENST00000355547 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
PDZD3-202ENST00000355547 ARID5BQ14865 1188 aa21.1■□□□□ 0.97
PDZD3-202ENST00000355547 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
PDZD3-202ENST00000355547 KCND1Q9NSA2 647 aa21.1■□□□□ 0.97
PDZD3-202ENST00000355547 YEATS4O95619 227 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 POLR3EQ9NVU0 708 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 UBR2Q8IWV8 1755 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 DHX16O60231 1041 aaKnown RBP21.09■□□□□ 0.97
PDZD3-202ENST00000355547 PPFIA3O75145 1194 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
PDZD3-202ENST00000355547 NYAP1Q6ZVC0 841 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
PDZD3-202ENST00000355547 RGS22Q8NE09 1264 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 FBXO18Q8NFZ0 1043 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 KCNG4Q8TDN1 519 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 HPS5Q9UPZ3 1129 aa21.09■□□□□ 0.97
PDZD3-202ENST00000355547 SKILP12757 684 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 CCZ1BP86790 482 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 CCZ1P86791 482 aaPredicted RBP21.08■□□□□ 0.97
PDZD3-202ENST00000355547 CCDC158Q5M9N0 1113 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 CCDC112Q8NEF3 446 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 BPIFA3Q9BQP9 254 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 AKAP2Q9Y2D5 859 aa21.08■□□□□ 0.97
PDZD3-202ENST00000355547 A0A087WWV3 80 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 FGAP02671 866 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 ZSCAN20P17040 1043 aaPredicted RBP21.08■□□□□ 0.96
PDZD3-202ENST00000355547 FKBP4Q02790 459 aaKnown RBP eCLIP21.08■□□□□ 0.96
PDZD3-202ENST00000355547 CEP135Q66GS9 1140 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 BRAPQ7Z569 592 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 AOPEPQ8N6M6 819 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 C8orf76Q96K31 380 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 SDF4Q9BRK5 362 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 NWD2Q9ULI1 1742 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 SOS2Q07890 1332 aaPredicted RBP21.08■□□□□ 0.96
PDZD3-202ENST00000355547 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.96
PDZD3-202ENST00000355547 CCDC69A6NI79 296 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 NDUFA8P51970 172 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 CLIC4Q9Y696 253 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 NEDD4P46934 1319 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 WDR19Q8NEZ3 1342 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 ABCC12Q96J65 1359 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 A0A1B0GVL5 298 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 PRC1O43663 620 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 NKX1-1Q15270 411 aaPredicted RBP21.07■□□□□ 0.96
PDZD3-202ENST00000355547 ZCRB1Q8TBF4 217 aaKnown RBP21.07■□□□□ 0.96
PDZD3-202ENST00000355547 XAGE2Q96GT9 111 aa21.07■□□□□ 0.96
PDZD3-202ENST00000355547 OSBPL5Q9H0X9 879 aaPredicted RBP21.07■□□□□ 0.96
PDZD3-202ENST00000355547 ADORA1P30542 326 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 CBX1P83916 185 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 STK38Q15208 465 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 OTUD7BQ6GQQ9 843 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 APPBP2Q92624 585 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 SPATA31A3Q5VYP0 1347 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 USP27XA6NNY8 438 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 GSDMDP57764 484 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 ANTXR2P58335 489 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
PDZD3-202ENST00000355547 CCDC57Q2TAC2 916 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 MYSM1Q5VVJ2 828 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 FEZ1Q99689 392 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 IMPACTQ9P2X3 320 aa21.06■□□□□ 0.96
PDZD3-202ENST00000355547 ORC3Q9UBD5 711 aaPredicted RBP21.06■□□□□ 0.96
PDZD3-202ENST00000355547 KLF18A0A0U1RQI7 1052 aa21.05■□□□□ 0.96
PDZD3-202ENST00000355547 SPTLC2O15270 562 aa21.05■□□□□ 0.96
PDZD3-202ENST00000355547 WASHC4Q2M389 1173 aa21.05■□□□□ 0.96
PDZD3-202ENST00000355547 NBPF11Q86T75 865 aa21.05■□□□□ 0.96
PDZD3-202ENST00000355547 ERCC4Q92889 916 aaPredicted RBP21.05■□□□□ 0.96
PDZD3-202ENST00000355547 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
PDZD3-202ENST00000355547 HAND2P61296 217 aa21.04■□□□□ 0.96
PDZD3-202ENST00000355547 SF3A1Q15459 793 aaKnown RBP21.04■□□□□ 0.96
PDZD3-202ENST00000355547 GORABQ5T7V8 394 aa21.04■□□□□ 0.96
PDZD3-202ENST00000355547 FILIP1Q7Z7B0 1213 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms