RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SCRN1Q12765 414 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 CFAP100Q494V2 611 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 HSP90AB4PQ58FF6 505 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 ATL3Q6DD88 541 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 ADALQ6DHV7 355 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 TOGARAM2Q6ZUX3 1019 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 CLASRPQ8N2M8 674 aaKnown RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 SMARCC2Q8TAQ2 1214 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 CARD10Q9BWT7 1032 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 SIL1Q9H173 461 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 PUF60Q9UHX1 559 aaKnown RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 ERLIN2O94905 339 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 SLC3A2P08195 630 aaKnown RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 MNAT1P51948 309 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 OS9Q13438 667 aaPredicted RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 BAG1Q99933 345 aaPredicted RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 CPS1P31327 1500 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 NBPF7P0C2Y1 421 aaPredicted RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 Q6ZUG5 572 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 HMG20BQ9P0W2 317 aa9.04□□□□□ -0.96
CD46-203ENST00000354848 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
CD46-203ENST00000354848 CCDC196A0A1B0GTZ2 297 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 A0A1W2PQ27 194 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 A0A1W2PQ64 194 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 A0A1W2PQD8 194 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 HIP1O00291 1037 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 HNRNPH1P31943 449 aaKnown RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 KARSQ15046 597 aaKnown RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 SKIDA1Q1XH10 827 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 ISM2Q6H9L7 571 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 DLC1Q96QB1 1528 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 EXOC5O00471 708 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 STX10O60499 249 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 LIG3P49916 1009 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 VSNL1P62760 191 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 TTLL5Q6EMB2 1281 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 KCNV1Q6PIU1 500 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 NSUN7Q8NE18 718 aaKnown RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 GPATCH3Q96I76 525 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 FAM107BQ9H098 131 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 RGPD1P0DJD0 1748 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 LRRIQ3A6PVS8 624 aaPredicted RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
CD46-203ENST00000354848 CEP112Q8N8E3 955 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 MED23Q9ULK4 1368 aa9.03□□□□□ -0.96
CD46-203ENST00000354848 JCADQ9P266 1359 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 RNF40O75150 1001 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
CD46-203ENST00000354848 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 NEK1Q96PY6 1258 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 LLPHQ9BRT6 129 aaKnown RBP9.02□□□□□ -0.97
CD46-203ENST00000354848 DESI2Q9BSY9 194 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 CDC23Q9UJX2 597 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 CHD1O14646 1710 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 LAMA4Q16363 1823 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 CTDNEP1O95476 244 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 RHOXF2BP0C7M4 288 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 DHX37Q8IY37 1157 aaKnown RBP9.02□□□□□ -0.97
CD46-203ENST00000354848 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 RHOXF2Q9BQY4 288 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 PHAXQ9H814 394 aaKnown RBP9.02□□□□□ -0.97
CD46-203ENST00000354848 MRPL44Q9H9J2 332 aaKnown RBP9.02□□□□□ -0.97
CD46-203ENST00000354848 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
CD46-203ENST00000354848 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 ZNF202O95125 648 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 TDO2P48775 406 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 SATB1Q01826 763 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 MYL5Q02045 173 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 TBX2Q13207 712 aaPredicted RBP9.01□□□□□ -0.97
CD46-203ENST00000354848 MTX1Q13505 466 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 PDILTQ8N807 584 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 FAM212AQ96EL1 285 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 SEC62Q99442 399 aaKnown RBP9.01□□□□□ -0.97
CD46-203ENST00000354848 LRRC2Q9BYS8 371 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 ACBD3Q9H3P7 528 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 AGLP35573 1532 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 C3P01024 1663 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 PFKFB2O60825 505 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 PRPF6O94906 941 aaKnown RBP9.01□□□□□ -0.97
CD46-203ENST00000354848 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
CD46-203ENST00000354848 USP8P40818 1118 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
CD46-203ENST00000354848 KRT32Q14532 448 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 WAPLQ7Z5K2 1190 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 LINC00301Q8NCQ3 95 aa9.01□□□□□ -0.97
CD46-203ENST00000354848 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms