RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TRIM5Q9C035 493 aa14.09□□□□□ -0.15
SMAD9-201ENST00000350148 PPP1R1BQ9UD71 204 aaPredicted RBP14.08□□□□□ -0.15
SMAD9-201ENST00000350148 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.15
SMAD9-201ENST00000350148 SEMA3EO15041 775 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 RAB34Q9BZG1 259 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 CWC15Q9P013 229 aaKnown RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 CCT2P78371 535 aaKnown RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 RTN1Q16799 776 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 TMED8Q6PL24 325 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 SUPT20HQ8NEM7 779 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 EAF2Q96CJ1 260 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 GGA1Q9UJY5 639 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 ZNF594Q96JF6 807 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 KIF13AQ9H1H9 1805 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 HELBQ8NG08 1087 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 KLHDC4Q8TBB5 520 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 TBC1D22AQ8WUA7 517 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
SMAD9-201ENST00000350148 MAGEC2Q9UBF1 373 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-201ENST00000350148 MPHOSPH10O00566 681 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 MYO1BO43795 1136 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 POLD1P28340 1107 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 FERMT3Q86UX7 667 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 CDHR2Q9BYE9 1310 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 PCMTD1Q96MG8 357 aaPredicted RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 NSFL1CQ9UNZ2 370 aaKnown RBP14.07□□□□□ -0.16
SMAD9-201ENST00000350148 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
SMAD9-201ENST00000350148 F13A1P00488 732 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 UBE4AQ14139 1066 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 KDM4AO75164 1064 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 NLRP5P59047 1200 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 RNF214Q8ND24 703 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
SMAD9-201ENST00000350148 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 TRIM28Q13263 835 aaKnown RBP14.06□□□□□ -0.16
SMAD9-201ENST00000350148 NLRP10Q86W26 655 aa14.06□□□□□ -0.16
SMAD9-201ENST00000350148 CCDC194A0A1B0GVG4 234 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 MBD4O95243 580 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 PDE6BP35913 854 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
SMAD9-201ENST00000350148 ANKRD26Q9UPS8 1709 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 UVSSAQ2YD98 709 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 SMARCE1Q969G3 411 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 RFX7Q2KHR2 1363 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 GPAA1O43292 621 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 ATP2B4P23634 1241 aa14.05□□□□□ -0.16
SMAD9-201ENST00000350148 RDXP35241 583 aaKnown RBP14.04□□□□□ -0.16
SMAD9-201ENST00000350148 NLGN1Q8N2Q7 840 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 UQCRHLA0A096LP55 91 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 PDE8BO95263 885 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 UQCRHP07919 91 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 NT5C2P49902 561 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-201ENST00000350148 CUL5Q93034 780 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 SLC26A6Q9BXS9 759 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
SMAD9-201ENST00000350148 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 CALML3P27482 149 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
SMAD9-201ENST00000350148 UFL1O94874 794 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 BARGINQ6ZT62 677 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 PCP11498 1178 aaKnown RBP14.03□□□□□ -0.16
SMAD9-201ENST00000350148 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 KRT18P05783 430 aaKnown RBP14.03□□□□□ -0.16
SMAD9-201ENST00000350148 ADRA2BP18089 450 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 VPS72Q15906 364 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
SMAD9-201ENST00000350148 ZAP70P43403 619 aa14.02□□□□□ -0.16
SMAD9-201ENST00000350148 TNIP1Q15025 636 aa14.02□□□□□ -0.16
SMAD9-201ENST00000350148 LEMD3Q9Y2U8 911 aa14.02□□□□□ -0.16
SMAD9-201ENST00000350148 RPS6KA4O75676 772 aa14.02□□□□□ -0.17
SMAD9-201ENST00000350148 IQSEC3Q9UPP2 1182 aaPredicted RBP14.02□□□□□ -0.17
SMAD9-201ENST00000350148 BAG6P46379 1132 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms