RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
CLCC1-202ENST00000348264 HSPA8P11142 646 aaKnown RBP16.67■□□□□ 0.26
CLCC1-202ENST00000348264 MMP14P50281 582 aa16.67■□□□□ 0.26
CLCC1-202ENST00000348264 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
CLCC1-202ENST00000348264 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
CLCC1-202ENST00000348264 FAM84BQ96KN1 310 aaPredicted RBP16.67■□□□□ 0.26
CLCC1-202ENST00000348264 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
CLCC1-202ENST00000348264 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
CLCC1-202ENST00000348264 MAP2K2P36507 400 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 LBX1P52954 281 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLCC1-202ENST00000348264 PRAMEF18Q5VWM3 479 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
CLCC1-202ENST00000348264 ZIC5Q96T25 663 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 FAM205AQ6ZU69 1335 aa16.66■□□□□ 0.26
CLCC1-202ENST00000348264 FAM155AB1AL88 458 aaPredicted RBP16.65■□□□□ 0.26
CLCC1-202ENST00000348264 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
CLCC1-202ENST00000348264 FKBP1AP62942 108 aaKnown RBP16.65■□□□□ 0.26
CLCC1-202ENST00000348264 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
CLCC1-202ENST00000348264 RGMBQ6NW40 437 aa16.65■□□□□ 0.26
CLCC1-202ENST00000348264 MEIS3Q99687 375 aa16.65■□□□□ 0.26
CLCC1-202ENST00000348264 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
CLCC1-202ENST00000348264 LRRFIP2Q9Y608 721 aaKnown RBP16.65■□□□□ 0.26
CLCC1-202ENST00000348264 EYA2O00167 538 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 PDE8BO95263 885 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 NOGQ13253 232 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 AOX1Q06278 1338 aa16.64■□□□□ 0.25
CLCC1-202ENST00000348264 BCAR3O75815 825 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 TRIM27P14373 513 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 DLGAP5Q15398 846 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 MFSD14BQ5SR56 506 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
CLCC1-202ENST00000348264 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
CLCC1-202ENST00000348264 MTMR14Q8NCE2 650 aa16.63■□□□□ 0.25
CLCC1-202ENST00000348264 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
CLCC1-202ENST00000348264 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
CLCC1-202ENST00000348264 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 SLC10A3P09131 477 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 FGFR2P21802 821 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 ZNF157P51786 506 aaPredicted RBP16.62■□□□□ 0.25
CLCC1-202ENST00000348264 FKBP1BP68106 108 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 PUM3Q15397 648 aaKnown RBP16.62■□□□□ 0.25
CLCC1-202ENST00000348264 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 BEGAINQ9BUH8 593 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 SIL1Q9H173 461 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 AKAP11Q9UKA4 1901 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 CASP8AP2Q9UKL3 1982 aa16.62■□□□□ 0.25
CLCC1-202ENST00000348264 BCAMP50895 628 aa16.61■□□□□ 0.25
CLCC1-202ENST00000348264 VPS37DQ86XT2 251 aa16.61■□□□□ 0.25
CLCC1-202ENST00000348264 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
CLCC1-202ENST00000348264 GRIK5Q16478 980 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 CAVIN4Q5BKX8 364 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 RASAL3Q86YV0 1011 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
CLCC1-202ENST00000348264 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
CLCC1-202ENST00000348264 PRMT6Q96LA8 375 aaPredicted RBP16.6■□□□□ 0.25
CLCC1-202ENST00000348264 TTF2Q9UNY4 1162 aaKnown RBP16.6■□□□□ 0.25
CLCC1-202ENST00000348264 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
CLCC1-202ENST00000348264 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
CLCC1-202ENST00000348264 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
CLCC1-202ENST00000348264 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.24
CLCC1-202ENST00000348264 CIAO1O76071 339 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 SLC5A1P13866 664 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 NF2P35240 595 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLCC1-202ENST00000348264 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
CLCC1-202ENST00000348264 TTLL12Q14166 644 aaPredicted RBP16.58■□□□□ 0.24
CLCC1-202ENST00000348264 LPIN2Q92539 896 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 VEZTQ9HBM0 779 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 SERPINA10Q9UK55 444 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
CLCC1-202ENST00000348264 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 CA12O43570 354 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 MYO1BO43795 1136 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 FRAT2O75474 233 aaPredicted RBP16.57■□□□□ 0.24
CLCC1-202ENST00000348264 CAPN15O75808 1086 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 GNAI3P08754 354 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 PRKG1Q13976 671 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 COPRSQ9NQ92 184 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 FZD1Q9UP38 647 aa16.57■□□□□ 0.24
CLCC1-202ENST00000348264 CRKP46108 304 aa16.56■□□□□ 0.24
CLCC1-202ENST00000348264 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
CLCC1-202ENST00000348264 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
CLCC1-202ENST00000348264 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
CLCC1-202ENST00000348264 TBC1D22AQ8WUA7 517 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms