RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NUP62CLQ9H1M0 184 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 NAP1L2Q9ULW6 460 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-201ENST00000347613 NHSL1Q5SYE7 1610 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 POLR3DP05423 398 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-201ENST00000347613 EVX2Q03828 476 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 IQCB1Q15051 598 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 UVSSAQ2YD98 709 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 KIAA1524Q8TCG1 905 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 CLSTN2Q9H4D0 955 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 TBC1D2BQ9UPU7 963 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 ZBTB1Q9Y2K1 713 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 DCCP43146 1447 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 USP27XA6NNY8 438 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 MAP3K11Q16584 847 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 DSCC1Q9BVC3 393 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 CARD10Q9BWT7 1032 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 TNMDQ9H2S6 317 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 HELLSQ9NRZ9 838 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 SPEF2Q9C093 1822 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 CARMIL3Q8ND23 1372 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 PHKA1P46020 1223 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 MB21D2Q8IYB1 491 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 MYL10Q9BUA6 226 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 A0A1B0GVL5 298 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 ITGA6P23229 1130 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 CDC27P30260 824 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 ANKRD1Q15327 319 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 CCDC186Q7Z3E2 898 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 NLRP10Q86W26 655 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 PLA2G4DQ86XP0 818 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 DHX40Q8IX18 779 aaKnown RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 STK11IPQ8N1F8 1099 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 SPTLC3Q9NUV7 552 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 BTG4Q9NY30 223 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 PCDHA7Q9UN72 937 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 MYH14Q7Z406 1995 aaKnown RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 PHF14O94880 888 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 KCNQ4P56696 695 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 KIAA2012Q0VF49 1180 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 CCAR1Q8IX12 1150 aaKnown RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 FAM200AQ8TCP9 573 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 CACTINQ8WUQ7 758 aaKnown RBP7.12□□□□□ -1.27
CLCN3-201ENST00000347613 SEC31BQ9NQW1 1179 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 RCOR1Q9UKL0 485 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 ATP6V1DQ9Y5K8 247 aa7.12□□□□□ -1.27
CLCN3-201ENST00000347613 WDHD1O75717 1129 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-201ENST00000347613 CIAO1O76071 339 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 CYP19A1P11511 503 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-201ENST00000347613 NDUFA8P51970 172 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 WASHC4Q2M389 1173 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 ISM2Q6H9L7 571 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 FAM184AQ8NB25 1140 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 BICD2Q8TD16 824 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 GPR108Q9NPR9 543 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 MYH3P11055 1940 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 GPAA1O43292 621 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 PRKAB2O43741 272 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 CCDC192P0DO97 292 aa7.11□□□□□ -1.27
CLCN3-201ENST00000347613 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
CLCN3-201ENST00000347613 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-201ENST00000347613 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-201ENST00000347613 TCRBV5S4A2TA0A5A2 114 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 H3BQV1 296 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 TPM2P07951 284 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 CCDC57Q2TAC2 916 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 IFFO2Q5TF58 517 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 ZBTB38Q8NAP3 1195 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 PHKBQ93100 1093 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 TMOD3Q9NYL9 352 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 MROH7-TTC4A0A0A0MT08 1334 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 RFX7Q2KHR2 1363 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 PRC1O43663 620 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 GUCY1A2P33402 732 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 MCM5P33992 734 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 ZNF75DP51815 510 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 EVCP57679 992 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 KRT32Q14532 448 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 ADGRA1Q86SQ6 560 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 SCAND2PQ9GZW5 306 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 EPB41L4AQ9HCS5 686 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 LRP6O75581 1613 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 RANBP6O60518 1105 aaKnown RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 LETM1O95202 739 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 PCCAP05165 728 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 ZNF165P49910 485 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
CLCN3-201ENST00000347613 C3orf67Q6ZVT6 689 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 PTF1AQ7RTS3 328 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 HSD3B7Q9H2F3 369 aa7.1□□□□□ -1.27
CLCN3-201ENST00000347613 KLF18A0A0U1RQI7 1052 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 PDCP20941 246 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 EVA1CP58658 441 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms