RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
CSNK1G3-201ENST00000345990 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
CSNK1G3-201ENST00000345990 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
CSNK1G3-201ENST00000345990 ERFEQ4G0M1 354 aa15.97■□□□□ 0.15
CSNK1G3-201ENST00000345990 TAF5LO75529 589 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 MBD4O95243 580 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 NT5C2P49902 561 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 GRAPQ13588 217 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 GRAPLQ8TC17 118 aaPredicted RBP15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 SDF4Q9BRK5 362 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 ZNF804BA4D1E1 1349 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 HAND2P61296 217 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 CCAR1Q8IX12 1150 aaKnown RBP15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 TMEM87BQ96K49 555 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 TM6SF1Q9BZW5 370 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
CSNK1G3-201ENST00000345990 RIMBP2O15034 1052 aa15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZBTB43O43298 467 aa15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 TSPY3P0CV98 308 aa15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 TSPY8P0CW00 308 aa15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 UBE3CQ15386 1083 aa15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 INTS4Q96HW7 963 aaKnown RBP15.96■□□□□ 0.14
CSNK1G3-201ENST00000345990 KCNQ2O43526 872 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 MSNP26038 577 aaKnown RBP15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 LRRC24Q50LG9 513 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZAP70P43403 619 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 PPP2R5BQ15173 497 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 HLFQ16534 295 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
CSNK1G3-201ENST00000345990 GPAA1O43292 621 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 GSE1Q14687 1217 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZSCAN16Q9H4T2 348 aaPredicted RBP15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 IFIT1BQ5T764 474 aaKnown RBP15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 BRF1Q92994 677 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 NFAT5O94916 1531 aa15.94■□□□□ 0.14
CSNK1G3-201ENST00000345990 PRC1O43663 620 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 PCP11498 1178 aaKnown RBP15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 DNTTIP2Q5QJE6 756 aaKnown RBP15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 CDK5RAP3Q96JB5 506 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 TMX3Q96JJ7 454 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 FIBPO43427 364 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 TRAK2O60296 914 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 KLF18A0A0U1RQI7 1052 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 TULP1O00294 542 aaPredicted RBP15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 CCDC96Q2M329 555 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 TPM1P09493 284 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
CSNK1G3-201ENST00000345990 OLFM4Q6UX06 510 aa15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 SRP68Q9UHB9 627 aaKnown RBP15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 UTYO14607 1347 aa15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 LMOD1P29536 600 aaPredicted RBP15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 DBNLQ9UJU6 430 aaKnown RBP15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 DDX11Q96FC9 970 aa15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 ORC3Q9UBD5 711 aaPredicted RBP15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
CSNK1G3-201ENST00000345990 NF2P35240 595 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 ME1P48163 572 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 BMP15O95972 392 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 RTN1Q16799 776 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 MIGA1Q8NAN2 632 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 CCDC148Q8NFR7 591 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 CUL5Q93034 780 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 SH2D4AQ9H788 454 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 ZNF532Q9HCE3 1301 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 MCM4P33991 863 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 HSPA4P34932 840 aa15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 RBM28Q9NW13 759 aaKnown RBP15.91■□□□□ 0.14
CSNK1G3-201ENST00000345990 PATL2C9JE40 543 aaKnown RBP15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 F8W031 263 aaPredicted RBP15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 Q6ZUG5 572 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 CCDC125Q86Z20 511 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 BCL9O00512 1426 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 PPIP5K2O43314 1243 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 FEZ1Q99689 392 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 SLC27A2O14975 620 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 STX6O43752 255 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 MMP10P09238 476 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms