RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-202ENST00000345734 EYA2O00167 538 aa11.17□□□□□ -0.62
ATG4A-202ENST00000345734 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-202ENST00000345734 IL15P40933 162 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-202ENST00000345734 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
ATG4A-202ENST00000345734 SMARCC1Q92922 1105 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-202ENST00000345734 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
ATG4A-202ENST00000345734 EP400Q96L91 3159 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 CSF1RP07333 972 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 ZNF34Q8IZ26 560 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 EDC3Q96F86 508 aaKnown RBP11.16□□□□□ -0.62
ATG4A-202ENST00000345734 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
ATG4A-202ENST00000345734 NDUFB9Q9Y6M9 179 aa11.16□□□□□ -0.62
ATG4A-202ENST00000345734 BTAF1O14981 1849 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 AP1G2O75843 785 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 TIMM10P62072 90 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 LSG1Q9H089 658 aaKnown RBP11.15□□□□□ -0.62
ATG4A-202ENST00000345734 AFF2P51816 1311 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 IRS4O14654 1257 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-202ENST00000345734 SPTLC1O15269 473 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-202ENST00000345734 CIAO1O76071 339 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 CAMTA2O94983 1202 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 ATP5JP18859 108 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 MCCP23508 829 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 FAM227BQ96M60 508 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 GREM2Q9H772 168 aa11.15□□□□□ -0.62
ATG4A-202ENST00000345734 RAD50Q92878 1312 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 IFIT5Q13325 482 aaKnown RBP11.14□□□□□ -0.63
ATG4A-202ENST00000345734 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-202ENST00000345734 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 FAM177BA6PVY3 158 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 HSPA4P34932 840 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 DDIT3P35638 169 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 CTSWP56202 376 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-202ENST00000345734 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 PPP2R2DQ66LE6 453 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
ATG4A-202ENST00000345734 ZNF609O15014 1411 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 KDM4AO75164 1064 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 ITGA6P23229 1130 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 PTH1RQ03431 593 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
ATG4A-202ENST00000345734 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
ATG4A-202ENST00000345734 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 A0A1B0GUL7 405 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
ATG4A-202ENST00000345734 ST18O60284 1047 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 NEK4P51957 841 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 ANAPC15P60006 121 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 KIAA1211Q6ZU35 1233 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 HAUS7Q99871 368 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 PDE8AO60658 829 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 CHGBP05060 677 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 HSP90AA1P07900 732 aaKnown RBP11.12□□□□□ -0.63
ATG4A-202ENST00000345734 HCLS1P14317 486 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-202ENST00000345734 ABL2P42684 1182 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
ATG4A-202ENST00000345734 DDX60Q8IY21 1712 aaKnown RBP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 RIC1Q4ADV7 1423 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 HIP1O00291 1037 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 ADORA1P30542 326 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 TMEM259Q4ZIN3 620 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 IL17RAQ96F46 866 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 UTP14AQ9BVJ6 771 aaKnown RBP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 NIP7Q9Y221 180 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 ATRNO75882 1429 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 SLC10A3P09131 477 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
ATG4A-202ENST00000345734 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 SNX14Q9Y5W7 946 aa11.11□□□□□ -0.63
ATG4A-202ENST00000345734 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
ATG4A-202ENST00000345734 LILRB3O75022 631 aa11.1□□□□□ -0.63
ATG4A-202ENST00000345734 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
ATG4A-202ENST00000345734 ZNF589Q86UQ0 364 aaPredicted RBP11.1□□□□□ -0.63
ATG4A-202ENST00000345734 TSC1Q92574 1164 aa11.1□□□□□ -0.63
ATG4A-202ENST00000345734 CCDC171Q6TFL3 1326 aa11.1□□□□□ -0.63
ATG4A-202ENST00000345734 GOLIM4O00461 696 aa11.09□□□□□ -0.63
ATG4A-202ENST00000345734 NTSR2O95665 410 aa11.09□□□□□ -0.63
ATG4A-202ENST00000345734 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms