RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CYP26C1Q6V0L0 522 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 ZGPATQ8N5A5 531 aaKnown RBP21.78■■□□□ 1.08
HDAC4-201ENST00000345617 FAN1Q9Y2M0 1017 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 MGEA5O60502 916 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 KIFAP3Q92845 792 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 HVCN1Q96D96 273 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
HDAC4-201ENST00000345617 SPTLC2O15270 562 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 EVCP57679 992 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 C8orf74Q6P047 294 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 NCAPGQ9BPX3 1015 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-201ENST00000345617 GUCY1B3Q02153 619 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 WTAPQ15007 396 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 ZBTB43O43298 467 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 GKAP1Q5VSY0 366 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-201ENST00000345617 KCNK9Q9NPC2 374 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 HLA-DOAP06340 250 aa21.77■■□□□ 1.08
HDAC4-201ENST00000345617 GTF3C6Q969F1 213 aa21.77■■□□□ 1.07
HDAC4-201ENST00000345617 CALM1P0DP23 149 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 CALM2P0DP24 149 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 CALM3P0DP25 149 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 RPL13P26373 211 aaKnown RBP21.76■■□□□ 1.07
HDAC4-201ENST00000345617 SRGAP1Q7Z6B7 1085 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 ESR2Q92731 530 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 MAK16Q9BXY0 300 aaKnown RBP21.76■■□□□ 1.07
HDAC4-201ENST00000345617 LARSQ9P2J5 1176 aaKnown RBP21.76■■□□□ 1.07
HDAC4-201ENST00000345617 CFAP43Q8NDM7 1665 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 TTC41PQ6P2S7 1318 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 PRIM1P49642 420 aaKnown RBP21.76■■□□□ 1.07
HDAC4-201ENST00000345617 CCDC122Q5T0U0 273 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 GBP5Q96PP8 586 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 CAPZA3Q96KX2 299 aa21.76■■□□□ 1.07
HDAC4-201ENST00000345617 GON4LQ3T8J9 2241 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 TFIP11Q9UBB9 837 aaKnown RBP21.75■■□□□ 1.07
HDAC4-201ENST00000345617 ZNF569Q5MCW4 686 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 SAMM50Q9Y512 469 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 RILPL1Q5EBL4 403 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 PPP1R9BQ96SB3 815 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 RTN1Q16799 776 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 ZNF644Q9H582 1327 aaPredicted RBP21.75■■□□□ 1.07
HDAC4-201ENST00000345617 DACT1Q9NYF0 836 aa21.75■■□□□ 1.07
HDAC4-201ENST00000345617 RHOXF2BP0C7M4 288 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 ASIC1P78348 528 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 RHOXF2Q9BQY4 288 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 SDCCAG8Q86SQ7 713 aaPredicted RBP21.74■■□□□ 1.07
HDAC4-201ENST00000345617 RBBP5Q15291 538 aaKnown RBP21.74■■□□□ 1.07
HDAC4-201ENST00000345617 CCDC82Q8N4S0 544 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 GNAT2P19087 354 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
HDAC4-201ENST00000345617 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
HDAC4-201ENST00000345617 TRIM75PA6NK02 468 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 ZPR1O75312 459 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 LDHCP07864 332 aa21.74■■□□□ 1.07
HDAC4-201ENST00000345617 DNAJC25Q9H1X3 360 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 LZTFL1Q9NQ48 299 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 SYCE1Q8N0S2 351 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 SMARCA5O60264 1052 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-201ENST00000345617 PPFIA4O75335 1185 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 EEF2P13639 858 aaKnown RBP21.73■■□□□ 1.07
HDAC4-201ENST00000345617 PTGS1P23219 599 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 RFC1P35251 1148 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-201ENST00000345617 FLIIQ13045 1269 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 TSPYL2Q9H2G4 693 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-201ENST00000345617 HSP90AA5PQ58FG0 334 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 IFIT1BQ5T764 474 aaKnown RBP21.73■■□□□ 1.07
HDAC4-201ENST00000345617 MED4Q9NPJ6 270 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 HAUS8Q9BT25 410 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 PPP1R12CQ9BZL4 782 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 PARP2Q9UGN5 583 aa21.73■■□□□ 1.07
HDAC4-201ENST00000345617 PHACTR2O75167 634 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 NOX5Q96PH1 765 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 NUP58Q9BVL2 599 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 FRMD4BQ9Y2L6 1034 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 HPDP32754 393 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 PHLDB3Q6NSJ2 640 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 STK24Q9Y6E0 443 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 HS2ST1Q7LGA3 356 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 SPINK5Q9NQ38 1064 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 HMGB3O15347 200 aaKnown RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 RAB11FIP4Q86YS3 637 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 STK10O94804 968 aaKnown RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 ATP2A3Q93084 1043 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 PAK2Q13177 524 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 CCDC170Q8IYT3 715 aa21.72■■□□□ 1.07
HDAC4-201ENST00000345617 CDC5LQ99459 802 aaKnown RBP21.72■■□□□ 1.07
HDAC4-201ENST00000345617 LRCH2Q5VUJ6 765 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 PLCB3Q01970 1234 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 NAIPQ13075 1403 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms