RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 GGA3Q9NZ52 723 aa24.7■■□□□ 1.54
CLTA-202ENST00000345519 COL1A1P02452 1464 aaPredicted RBP24.7■■□□□ 1.54
CLTA-202ENST00000345519 OGFOD1Q8N543 542 aa24.69■■□□□ 1.54
CLTA-202ENST00000345519 PA2G4Q9UQ80 394 aaKnown RBP24.69■■□□□ 1.54
CLTA-202ENST00000345519 ASTN2O75129 1339 aaPredicted RBP24.68■■□□□ 1.54
CLTA-202ENST00000345519 WNT10BO00744 389 aa24.68■■□□□ 1.54
CLTA-202ENST00000345519 SIL1Q9H173 461 aa24.68■■□□□ 1.54
CLTA-202ENST00000345519 RCAN3Q9UKA8 241 aa24.68■■□□□ 1.54
CLTA-202ENST00000345519 AKAP11Q9UKA4 1901 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 PNMA6EA0A0J9YXQ4 647 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 IFIT1P09914 478 aaKnown RBP24.67■■□□□ 1.54
CLTA-202ENST00000345519 SCARF1Q14162 830 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 POLA2Q14181 598 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 CAVIN4Q5BKX8 364 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 KIAA0825Q8IV33 1275 aa24.67■■□□□ 1.54
CLTA-202ENST00000345519 SLC5A1P13866 664 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 RBM26Q5T8P6 1007 aaKnown RBP24.66■■□□□ 1.54
CLTA-202ENST00000345519 KRT26Q7Z3Y9 468 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 ITPRIPQ8IWB1 547 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 SSH3Q8TE77 659 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 FBXW7Q969H0 707 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 DCPSQ96C86 337 aaKnown RBP24.66■■□□□ 1.54
CLTA-202ENST00000345519 HHIPL1Q96JK4 782 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 HDAC9Q9UKV0 1011 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 TLL2Q9Y6L7 1015 aa24.66■■□□□ 1.54
CLTA-202ENST00000345519 MS4A1P11836 297 aa24.65■■□□□ 1.54
CLTA-202ENST00000345519 NBPF9Q3BBW0 867 aa24.65■■□□□ 1.54
CLTA-202ENST00000345519 ANGEL2Q5VTE6 544 aaKnown RBP24.65■■□□□ 1.54
CLTA-202ENST00000345519 CEP126Q9P2H0 1117 aa24.65■■□□□ 1.54
CLTA-202ENST00000345519 MYH2Q9UKX2 1941 aa24.65■■□□□ 1.54
CLTA-202ENST00000345519 ATP2B3Q16720 1220 aa24.64■■□□□ 1.54
CLTA-202ENST00000345519 MFSD14BQ5SR56 506 aa24.64■■□□□ 1.54
CLTA-202ENST00000345519 USP48Q86UV5 1035 aa24.64■■□□□ 1.54
CLTA-202ENST00000345519 ADM5C9JUS6 153 aa24.63■■□□□ 1.53
CLTA-202ENST00000345519 BCAMP50895 628 aa24.63■■□□□ 1.53
CLTA-202ENST00000345519 SAPCD2Q86UD0 394 aa24.63■■□□□ 1.53
CLTA-202ENST00000345519 PANK1Q8TE04 598 aa24.63■■□□□ 1.53
CLTA-202ENST00000345519 CELF2O95319 508 aaKnown RBP24.62■■□□□ 1.53
CLTA-202ENST00000345519 ATP8B2P98198 1209 aa24.62■■□□□ 1.53
CLTA-202ENST00000345519 VPS37DQ86XT2 251 aa24.62■■□□□ 1.53
CLTA-202ENST00000345519 SULF1Q8IWU6 871 aa24.62■■□□□ 1.53
CLTA-202ENST00000345519 TBC1D22AQ8WUA7 517 aa24.62■■□□□ 1.53
CLTA-202ENST00000345519 MVPQ14764 893 aaKnown RBP24.61■■□□□ 1.53
CLTA-202ENST00000345519 MKRN1Q9UHC7 482 aaKnown RBP24.61■■□□□ 1.53
CLTA-202ENST00000345519 SERPINA10Q9UK55 444 aa24.61■■□□□ 1.53
CLTA-202ENST00000345519 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
CLTA-202ENST00000345519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.61■■□□□ 1.53
CLTA-202ENST00000345519 MAST2Q6P0Q8 1798 aa24.61■■□□□ 1.53
CLTA-202ENST00000345519 OTOFQ9HC10 1997 aa24.61■■□□□ 1.53
CLTA-202ENST00000345519 PDS5AQ29RF7 1337 aaKnown RBP24.61■■□□□ 1.53
CLTA-202ENST00000345519 SPDYE2BA6NHP3 402 aa24.6■■□□□ 1.53
CLTA-202ENST00000345519 SPDYE6P0CI01 402 aa24.6■■□□□ 1.53
CLTA-202ENST00000345519 JAG2Q9Y219 1238 aa24.6■■□□□ 1.53
CLTA-202ENST00000345519 MYO5AQ9Y4I1 1855 aaKnown RBP24.6■■□□□ 1.53
CLTA-202ENST00000345519 SEMA3EO15041 775 aa24.59■■□□□ 1.53
CLTA-202ENST00000345519 DEFB115Q30KQ5 88 aa24.59■■□□□ 1.53
CLTA-202ENST00000345519 DLK2Q6UY11 383 aa24.59■■□□□ 1.53
CLTA-202ENST00000345519 CDCA5Q96FF9 252 aa24.59■■□□□ 1.53
CLTA-202ENST00000345519 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
CLTA-202ENST00000345519 SALL1Q9NSC2 1324 aa24.59■■□□□ 1.53
CLTA-202ENST00000345519 VEGFBP49765 207 aa24.58■■□□□ 1.53
CLTA-202ENST00000345519 HDLBPQ00341 1268 aaKnown RBP24.58■■□□□ 1.53
CLTA-202ENST00000345519 PDE3AQ14432 1141 aa24.58■■□□□ 1.53
CLTA-202ENST00000345519 CEP85Q6P2H3 762 aa24.58■■□□□ 1.53
CLTA-202ENST00000345519 APOBEC3FQ8IUX4 373 aaKnown RBP24.58■■□□□ 1.53
CLTA-202ENST00000345519 MRIQ9BWK5 157 aa24.58■■□□□ 1.53
CLTA-202ENST00000345519 ABT1Q9ULW3 272 aaKnown RBP24.58■■□□□ 1.53
CLTA-202ENST00000345519 AKAP2Q9Y2D5 859 aa24.58■■□□□ 1.53
CLTA-202ENST00000345519 DOCK2Q92608 1830 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 A0A1B0GUL7 405 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 TFCP2Q12800 502 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 DLGAP5Q15398 846 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 CFAP100Q494V2 611 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 C1orf115Q9H7X2 142 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 DDX19BQ9UMR2 479 aa24.57■■□□□ 1.52
CLTA-202ENST00000345519 IQSEC3Q9UPP2 1182 aaPredicted RBP24.57■■□□□ 1.52
CLTA-202ENST00000345519 GRIK5Q16478 980 aa24.56■■□□□ 1.52
CLTA-202ENST00000345519 GPR108Q9NPR9 543 aa24.56■■□□□ 1.52
CLTA-202ENST00000345519 ZBTB40Q9NUA8 1239 aa24.56■■□□□ 1.52
CLTA-202ENST00000345519 TTF2Q9UNY4 1162 aaKnown RBP24.56■■□□□ 1.52
CLTA-202ENST00000345519 PCDHAC2Q9Y5I4 1007 aa24.56■■□□□ 1.52
CLTA-202ENST00000345519 SSC5DA1L4H1 1573 aa24.55■■□□□ 1.52
CLTA-202ENST00000345519 PHKA1P46020 1223 aa24.55■■□□□ 1.52
CLTA-202ENST00000345519 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
CLTA-202ENST00000345519 WDR66Q8TBY9 1149 aa24.55■■□□□ 1.52
CLTA-202ENST00000345519 PRMT6Q96LA8 375 aaPredicted RBP24.55■■□□□ 1.52
CLTA-202ENST00000345519 AOX1Q06278 1338 aa24.55■■□□□ 1.52
CLTA-202ENST00000345519 WDR33Q9C0J8 1336 aaKnown RBP24.55■■□□□ 1.52
CLTA-202ENST00000345519 F8W031 263 aaPredicted RBP24.54■■□□□ 1.52
CLTA-202ENST00000345519 ADORA1P30542 326 aa24.54■■□□□ 1.52
CLTA-202ENST00000345519 FKBP1BP68106 108 aa24.54■■□□□ 1.52
CLTA-202ENST00000345519 GBA2Q9HCG7 927 aaPredicted RBP24.54■■□□□ 1.52
CLTA-202ENST00000345519 PPP2R3BQ9Y5P8 575 aa24.54■■□□□ 1.52
CLTA-202ENST00000345519 MAST3O60307 1309 aa24.54■■□□□ 1.52
CLTA-202ENST00000345519 CDK5RAP2Q96SN8 1893 aa24.53■■□□□ 1.52
CLTA-202ENST00000345519 TIMM10P62072 90 aa24.53■■□□□ 1.52
CLTA-202ENST00000345519 CHAF1AQ13111 956 aaPredicted RBP24.53■■□□□ 1.52
CLTA-202ENST00000345519 XAGE2Q96GT9 111 aa24.53■■□□□ 1.52
CLTA-202ENST00000345519 ZNF408Q9H9D4 720 aa24.53■■□□□ 1.52
CLTA-202ENST00000345519 GNL3LQ9NVN8 582 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms