RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
ATG4B-201ENST00000344376 WDR33Q9C0J8 1336 aaKnown RBP20.03■□□□□ 0.8
ATG4B-201ENST00000344376 FAM205AQ6ZU69 1335 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 WNT10BO00744 389 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
ATG4B-201ENST00000344376 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 FTSJ3Q8IY81 847 aaKnown RBP20.02■□□□□ 0.8
ATG4B-201ENST00000344376 CERS5Q8N5B7 392 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 C2orf69Q8N8R5 385 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 HHIPL1Q96JK4 782 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 CAPNS2Q96L46 248 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 SIL1Q9H173 461 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 JAG2Q9Y219 1238 aa20.02■□□□□ 0.8
ATG4B-201ENST00000344376 SLC5A1P13866 664 aa20.01■□□□□ 0.79
ATG4B-201ENST00000344376 GRM1Q13255 1194 aa20.01■□□□□ 0.79
ATG4B-201ENST00000344376 FBXO33Q7Z6M2 555 aa20.01■□□□□ 0.79
ATG4B-201ENST00000344376 CDCA5Q96FF9 252 aa20.01■□□□□ 0.79
ATG4B-201ENST00000344376 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-201ENST00000344376 F8W031 263 aaPredicted RBP20■□□□□ 0.79
ATG4B-201ENST00000344376 GNAI2P04899 355 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 DLGAP5Q15398 846 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 MFSD14BQ5SR56 506 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 DLK2Q6UY11 383 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 LPIN2Q92539 896 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 CEP126Q9P2H0 1117 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 TNNQ9UQP3 1299 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 SRGAP3O43295 1099 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 IL15P40933 162 aaPredicted RBP20■□□□□ 0.79
ATG4B-201ENST00000344376 HUNKP57058 714 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 CYP4F22Q6NT55 531 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 AIDAQ96BJ3 306 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 COPRSQ9NQ92 184 aa20■□□□□ 0.79
ATG4B-201ENST00000344376 FGFR2P21802 821 aa19.99■□□□□ 0.79
ATG4B-201ENST00000344376 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
ATG4B-201ENST00000344376 MYO1BO43795 1136 aa19.98■□□□□ 0.79
ATG4B-201ENST00000344376 MTX1Q13505 466 aa19.98■□□□□ 0.79
ATG4B-201ENST00000344376 DZIP1LQ8IYY4 767 aaKnown RBP19.98■□□□□ 0.79
ATG4B-201ENST00000344376 MTMR14Q8NCE2 650 aa19.98■□□□□ 0.79
ATG4B-201ENST00000344376 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
ATG4B-201ENST00000344376 MAP2K1Q02750 393 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-201ENST00000344376 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-201ENST00000344376 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
ATG4B-201ENST00000344376 ZBED3Q96IU2 234 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-201ENST00000344376 IQSEC3Q9UPP2 1182 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-201ENST00000344376 PA2G4Q9UQ80 394 aaKnown RBP19.97■□□□□ 0.79
ATG4B-201ENST00000344376 BCAMP50895 628 aa19.96■□□□□ 0.79
ATG4B-201ENST00000344376 RBM5P52756 815 aaKnown RBP eCLIP19.96■□□□□ 0.792e-12■■■□□ 18.6
ATG4B-201ENST00000344376 CFAP100Q494V2 611 aa19.96■□□□□ 0.79
ATG4B-201ENST00000344376 NF2P35240 595 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 FKBP1BP68106 108 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 TTF2Q9UNY4 1162 aaKnown RBP19.95■□□□□ 0.78
ATG4B-201ENST00000344376 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 MAP2K2P36507 400 aa19.95■□□□□ 0.78
ATG4B-201ENST00000344376 GNL3LQ9NVN8 582 aaKnown RBP19.95■□□□□ 0.78
ATG4B-201ENST00000344376 SCAF8Q9UPN6 1271 aaKnown RBP19.95■□□□□ 0.78
ATG4B-201ENST00000344376 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
ATG4B-201ENST00000344376 BEGAINQ9BUH8 593 aa19.94■□□□□ 0.78
ATG4B-201ENST00000344376 WBP1LQ9NX94 342 aa19.94■□□□□ 0.78
ATG4B-201ENST00000344376 SERPINA10Q9UK55 444 aa19.94■□□□□ 0.78
ATG4B-201ENST00000344376 THSD7BQ9C0I4 1608 aa19.94■□□□□ 0.78
ATG4B-201ENST00000344376 COL1A1P02452 1464 aaPredicted RBP19.94■□□□□ 0.78
ATG4B-201ENST00000344376 PCNTO95613 3336 aa19.93■□□□□ 0.78
ATG4B-201ENST00000344376 MS4A1P11836 297 aa19.93■□□□□ 0.78
ATG4B-201ENST00000344376 RGMBQ6NW40 437 aa19.93■□□□□ 0.78
ATG4B-201ENST00000344376 AOC2O75106 756 aa19.92■□□□□ 0.78
ATG4B-201ENST00000344376 NOGQ13253 232 aa19.92■□□□□ 0.78
ATG4B-201ENST00000344376 CCDC102AQ96A19 550 aa19.92■□□□□ 0.78
ATG4B-201ENST00000344376 AKAP2Q9Y2D5 859 aa19.92■□□□□ 0.78
ATG4B-201ENST00000344376 ARAP2Q8WZ64 1704 aa19.92■□□□□ 0.78
ATG4B-201ENST00000344376 CTCFP49711 727 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-201ENST00000344376 TTLL12Q14166 644 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-201ENST00000344376 PRMT6Q96LA8 375 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-201ENST00000344376 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 SUGT1Q9Y2Z0 365 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 PPP2R3BQ9Y5P8 575 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 MAST3O60307 1309 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 PAPPA2Q9BXP8 1791 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 CLRN2A0PK11 232 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 FOXN1O15353 648 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 ZNF157P51786 506 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-201ENST00000344376 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 PCDHAC2Q9Y5I4 1007 aa19.91■□□□□ 0.78
ATG4B-201ENST00000344376 RLBP1P12271 317 aa19.9■□□□□ 0.78
ATG4B-201ENST00000344376 CRKP46108 304 aa19.9■□□□□ 0.78
ATG4B-201ENST00000344376 HDLBPQ00341 1268 aaKnown RBP19.9■□□□□ 0.78
ATG4B-201ENST00000344376 G3BP1Q13283 466 aaKnown RBP eCLIP19.9■□□□□ 0.78
ATG4B-201ENST00000344376 DEFB129Q9H1M3 183 aa19.9■□□□□ 0.78
ATG4B-201ENST00000344376 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
ATG4B-201ENST00000344376 TNFAIP1Q13829 316 aa19.89■□□□□ 0.77
ATG4B-201ENST00000344376 TEKT1Q969V4 418 aa19.89■□□□□ 0.77
ATG4B-201ENST00000344376 SEMA3EO15041 775 aa19.88■□□□□ 0.77
ATG4B-201ENST00000344376 TFCP2Q12800 502 aa19.88■□□□□ 0.77
ATG4B-201ENST00000344376 DENND2AQ9ULE3 1009 aa19.88■□□□□ 0.77
ATG4B-201ENST00000344376 SPDYE2Q495Y8 402 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 ARMC9Q7Z3E5 817 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms