RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
FCF1-201ENST00000341162 NSUN7Q8NE18 718 aaKnown RBP8.38□□□□□ -1.07
FCF1-201ENST00000341162 NCOA7Q8NI08 942 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
FCF1-201ENST00000341162 RCOR1Q9UKL0 485 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 ITGA6P23229 1130 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 CCDC83Q8IWF9 413 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 BPIFA3Q9BQP9 254 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 BRPF3Q9ULD4 1205 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 NAV1Q8NEY1 1877 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 MYO5AQ9Y4I1 1855 aaKnown RBP8.38□□□□□ -1.07
FCF1-201ENST00000341162 LARGE1O95461 756 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 YEATS4O95619 227 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 DDB1Q16531 1140 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
FCF1-201ENST00000341162 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
FCF1-201ENST00000341162 ESPNB1AK53 854 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 FGRP09769 529 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
FCF1-201ENST00000341162 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 CLSTN2Q9H4D0 955 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 LRRC24Q50LG9 513 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 Q6ZUG5 572 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 WASF1Q92558 559 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 GOLIM4O00461 696 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 KRT23Q9C075 422 aa8.37□□□□□ -1.07
FCF1-201ENST00000341162 CCDC192P0DO97 292 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 TAF7LQ5H9L4 462 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
FCF1-201ENST00000341162 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
FCF1-201ENST00000341162 TIGD1Q96MW7 591 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 RTEL1Q9NZ71 1219 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 M0R2C6 588 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 METTL24Q5JXM2 366 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 SARM1Q6SZW1 724 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 STAG1Q8WVM7 1258 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 FOXP2O15409 715 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 TOM1O60784 492 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.36□□□□□ -1.07
FCF1-201ENST00000341162 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 DNAJC2Q99543 621 aaKnown RBP8.36□□□□□ -1.07
FCF1-201ENST00000341162 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
FCF1-201ENST00000341162 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
FCF1-201ENST00000341162 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 KLHDC4Q8TBB5 520 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 MAP3K14Q99558 947 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 PATL2C9JE40 543 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 TPM2P07951 284 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 PRKCSHP14314 528 aaPredicted RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 PDIA3P30101 505 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 LEO1Q8WVC0 666 aaPredicted RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 KCND1Q9NSA2 647 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 SIK1P57059 783 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 SCRN1Q12765 414 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 KCNG4Q8TDN1 519 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 GNL3LQ9NVN8 582 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 CRKLP46109 303 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 CCDC178Q5BJE1 867 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 LDHAL6AQ6ZMR3 332 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 TDRD7Q8NHU6 1098 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 OSBP2Q969R2 916 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 TRMT112Q9UI30 125 aaKnown RBP8.35□□□□□ -1.07
FCF1-201ENST00000341162 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 ZKSCAN5Q9Y2L8 839 aa8.35□□□□□ -1.07
FCF1-201ENST00000341162 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 MCAMP43121 646 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 DDX46Q7L014 1031 aaKnown RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 GORABQ5T7V8 394 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 CPLX2Q6PUV4 134 aaKnown RBP8.34□□□□□ -1.07
FCF1-201ENST00000341162 NUP62CLQ9H1M0 184 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 GREM2Q9H772 168 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 CDK5RAP2Q96SN8 1893 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 PPP6R2O75170 966 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 CCDC102BQ68D86 513 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 NEUROD6Q96NK8 337 aa8.34□□□□□ -1.07
FCF1-201ENST00000341162 MYH2Q9UKX2 1941 aa8.34□□□□□ -1.08
FCF1-201ENST00000341162 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
FCF1-201ENST00000341162 GOLGA6L6A8MZA4 724 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms