RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 IQSEC3Q9UPP2 1182 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-201ENST00000340611 CAMKK2Q96RR4 588 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 ATP5JP18859 108 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 CHRNDQ07001 517 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 TMEM63CQ9P1W3 806 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 ZDHHC9Q9Y397 364 aa17.91■□□□□ 0.46
BRAT1-201ENST00000340611 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 TM4SF1P30408 202 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 PHKA1P46020 1223 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 SEC62Q99442 399 aaKnown RBP17.9■□□□□ 0.46
BRAT1-201ENST00000340611 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
BRAT1-201ENST00000340611 IFIT1P09914 478 aaKnown RBP17.89■□□□□ 0.46
BRAT1-201ENST00000340611 SF3B3Q15393 1217 aaKnown RBP17.89■□□□□ 0.46
BRAT1-201ENST00000340611 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.46
BRAT1-201ENST00000340611 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.46
BRAT1-201ENST00000340611 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.46
BRAT1-201ENST00000340611 KIF3AQ9Y496 699 aa17.89■□□□□ 0.46
BRAT1-201ENST00000340611 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
BRAT1-201ENST00000340611 A0A0D9SFI3 127 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
BRAT1-201ENST00000340611 NMIQ13287 307 aaPredicted RBP17.88■□□□□ 0.45
BRAT1-201ENST00000340611 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 KLRK1P26718 216 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 GPR108Q9NPR9 543 aa17.88■□□□□ 0.45
BRAT1-201ENST00000340611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.88■□□□□ 0.45
BRAT1-201ENST00000340611 ZAP70P43403 619 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 CDC5LQ99459 802 aaKnown RBP17.87■□□□□ 0.45
BRAT1-201ENST00000340611 HAUS7Q99871 368 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 ST18O60284 1047 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 MMP10P09238 476 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 BCAMP50895 628 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 TRIM34Q9BYJ4 488 aa17.87■□□□□ 0.45
BRAT1-201ENST00000340611 ERICH4A6NGS2 130 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 MCAMP43121 646 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 RPS8P62241 208 aaKnown RBP17.86■□□□□ 0.45
BRAT1-201ENST00000340611 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 GPR101Q96P66 508 aaPredicted RBP17.86■□□□□ 0.45
BRAT1-201ENST00000340611 PAG1Q9NWQ8 432 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
BRAT1-201ENST00000340611 MYO5AQ9Y4I1 1855 aaKnown RBP17.86■□□□□ 0.45
BRAT1-201ENST00000340611 PTH1RQ03431 593 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 FOXD4L6Q3SYB3 417 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 CCDC102BQ68D86 513 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 FOXD4L3Q6VB84 417 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 ZNF589Q86UQ0 364 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 MROH5Q6ZUA9 1318 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 SGSM2O43147 1006 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 GYG1P46976 350 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 PUM3Q15397 648 aaKnown RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 SLC15A2Q16348 729 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 LRSAM1Q6UWE0 723 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
BRAT1-201ENST00000340611 FGFR2P21802 821 aa17.85■□□□□ 0.45
BRAT1-201ENST00000340611 LRP5O75197 1615 aa17.84■□□□□ 0.45
BRAT1-201ENST00000340611 REC8O95072 547 aa17.84■□□□□ 0.45
BRAT1-201ENST00000340611 MCM5P33992 734 aa17.84■□□□□ 0.45
BRAT1-201ENST00000340611 OLFM4Q6UX06 510 aa17.84■□□□□ 0.45
BRAT1-201ENST00000340611 LPIN2Q92539 896 aa17.83■□□□□ 0.45
BRAT1-201ENST00000340611 JAG2Q9Y219 1238 aa17.83■□□□□ 0.45
BRAT1-201ENST00000340611 RTL9Q8NET4 1388 aa17.83■□□□□ 0.44
BRAT1-201ENST00000340611 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-201ENST00000340611 ST5P78524 1137 aa17.82■□□□□ 0.44
BRAT1-201ENST00000340611 RGL2O15211 777 aa17.82■□□□□ 0.44
BRAT1-201ENST00000340611 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
BRAT1-201ENST00000340611 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
BRAT1-201ENST00000340611 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
BRAT1-201ENST00000340611 SLC5A1P13866 664 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 BAG6P46379 1132 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
BRAT1-201ENST00000340611 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 NEK4P51957 841 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 NLGN1Q8N2Q7 840 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 KBTBD3Q8NAB2 608 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
BRAT1-201ENST00000340611 LSG1Q9H089 658 aaKnown RBP17.81■□□□□ 0.44
BRAT1-201ENST00000340611 NOLC1Q14978 699 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRAT1-201ENST00000340611 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-201ENST00000340611 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-201ENST00000340611 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
BRAT1-201ENST00000340611 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
BRAT1-201ENST00000340611 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
BRAT1-201ENST00000340611 TAF6LQ9Y6J9 622 aa17.79■□□□□ 0.44
BRAT1-201ENST00000340611 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
BRAT1-201ENST00000340611 GDPD2Q9HCC8 539 aa17.79■□□□□ 0.44
BRAT1-201ENST00000340611 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
BRAT1-201ENST00000340611 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms