RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 APPBP2Q92624 585 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 AFF2P51816 1311 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
RBFOX1-202ENST00000340209 LPIN2Q92539 896 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
RBFOX1-202ENST00000340209 MTMR6Q9Y217 621 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 THRAP3Q9Y2W1 955 aaKnown RBP12□□□□□ -0.49
RBFOX1-202ENST00000340209 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 MAP3K12Q12852 859 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 AMIGO3Q86WK7 504 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 SDR42E1Q8WUS8 393 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 CDC5LQ99459 802 aaKnown RBP12□□□□□ -0.49
RBFOX1-202ENST00000340209 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 PRDM1O75626 825 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 TRIM37O94972 964 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 ATP2B1P20020 1258 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 CYP7A1P22680 504 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 SCRN1Q12765 414 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 NUP133Q8WUM0 1156 aa12□□□□□ -0.49
RBFOX1-202ENST00000340209 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 POLR3DP05423 398 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 KLRK1P26718 216 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 CKAP2LQ8IYA6 745 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 TM6SF1Q9BZW5 370 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 SLC4A4Q9Y6R1 1079 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 PHLPP1O60346 1717 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
RBFOX1-202ENST00000340209 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 SPATA32Q96LK8 384 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 CTNNA3Q9UI47 895 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 NTSR2O95665 410 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 MBD3O95983 291 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 SYAP1Q96A49 352 aaPredicted RBP11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 KRT85P78386 507 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 CDHR2Q9BYE9 1310 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 NHSL1Q5SYE7 1610 aa11.98□□□□□ -0.49
RBFOX1-202ENST00000340209 CYP2D7A0A087X1C5 515 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 ZSCAN25Q6NSZ9 544 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 PDCP20941 246 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 GTF3C6Q969F1 213 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 SMIM22K7EJ46 135 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 ADAMTS7Q9UKP4 1686 aa11.97□□□□□ -0.49
RBFOX1-202ENST00000340209 MROH5Q6ZUA9 1318 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 ZFYP08048 801 aaPredicted RBP11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 LCORLQ8N3X6 602 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 PHKBQ93100 1093 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 ADD2P35612 726 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 SF3A1Q15459 793 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 VPS72Q15906 364 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 TBC1D10CQ8IV04 446 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
RBFOX1-202ENST00000340209 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 ABCC6O95255 1503 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 hCG_1642624A0A1W2PR95 340 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 IFIT3O14879 490 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 MCM5P33992 734 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 DYNLL1P63167 89 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 ERCC4Q92889 916 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 AIFM3Q96NN9 605 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 SENP2Q9HC62 589 aa11.96□□□□□ -0.5
RBFOX1-202ENST00000340209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 MSL1Q68DK7 614 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 JCADQ9P266 1359 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 A0A087WWV3 80 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 RANBP6O60518 1105 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 TPTE2Q6XPS3 522 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 TSPY26PQ9H489 355 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 ORC3Q9UBD5 711 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 ITGB4P16144 1822 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 ADD1P35611 737 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 TTC6Q86TZ1 520 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
RBFOX1-202ENST00000340209 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 ME1P48163 572 aa11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 GLI3P10071 1580 aa11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms