RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ZKSCAN5Q9Y2L8 839 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 GPAA1O43292 621 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 JAK2O60674 1132 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CAMTA2O94983 1202 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CNNM1Q9NRU3 951 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 PTPDC1A2A3K4 754 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CCDC102BQ68D86 513 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 PUS7LQ9H0K6 701 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 GPTP24298 496 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CHD4Q14839 1912 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CASZ1Q86V15 1759 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MSNP26038 577 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SIK1P57059 783 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 STK3Q13188 491 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 USP25Q9UHP3 1055 aa12.6□□□□□ -0.39
TRAF3IP2-201ENST00000340026 H3BQV1 296 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ZNF213O14771 459 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 NTSR2O95665 410 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SLC5A1P13866 664 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CRKLP46109 303 aaKnown RBP12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 FGD1P98174 961 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 KDM4AO75164 1064 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ZNF396Q96N95 335 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CTAGE5O15320 804 aa12.58□□□□□ -0.39
TRAF3IP2-201ENST00000340026 IGSF3O75054 1194 aa12.58□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SUSD4Q5VX71 490 aa12.58□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TMEM87BQ96K49 555 aa12.58□□□□□ -0.39
TRAF3IP2-201ENST00000340026 OFD1O75665 1012 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PRC1O43663 620 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TPM3P06753 285 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PDE6AP16499 860 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 GNAT2P19087 354 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RCAN1P53805 252 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ANTXR2P58335 489 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 FERMT3Q86UX7 667 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PIH1D3Q9NQM4 214 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 LIG1P18858 919 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 BRAPQ7Z569 592 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 STRBPQ96SI9 672 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PHKA1P46020 1223 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RALYLQ86SE5 291 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SPATA5Q8NB90 893 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
TRAF3IP2-201ENST00000340026 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 GOLGA6L4A6NEF3 574 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 LIFRP42702 1097 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ITPK1Q13572 414 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 LRRC2Q9BYS8 371 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 THSD7AQ9UPZ6 1657 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 A0A1W2PQ27 194 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms