RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
SFN-201ENST00000339276 CLASRPQ8N2M8 674 aaKnown RBP20.56■□□□□ 0.88
SFN-201ENST00000339276 RRAGCQ9HB90 399 aa20.56■□□□□ 0.88
SFN-201ENST00000339276 FAM205AQ6ZU69 1335 aa20.56■□□□□ 0.88
SFN-201ENST00000339276 POTECB2RU33 542 aa20.55■□□□□ 0.88
SFN-201ENST00000339276 NEFLP07196 543 aa20.55■□□□□ 0.88
SFN-201ENST00000339276 CHAF1AQ13111 956 aaPredicted RBP20.55■□□□□ 0.88
SFN-201ENST00000339276 GNL3LQ9NVN8 582 aaKnown RBP20.55■□□□□ 0.88
SFN-201ENST00000339276 CERS5Q8N5B7 392 aa20.54■□□□□ 0.88
SFN-201ENST00000339276 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
SFN-201ENST00000339276 SHTN1A0MZ66 631 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 RPS12P25398 132 aaKnown RBP20.53■□□□□ 0.88
SFN-201ENST00000339276 EPS15P42566 896 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 GMLQ99445 158 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 SEMA3EO15041 775 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 IFIT2P09913 472 aaKnown RBP20.53■□□□□ 0.88
SFN-201ENST00000339276 ARID4AP29374 1257 aaPredicted RBP20.53■□□□□ 0.88
SFN-201ENST00000339276 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
SFN-201ENST00000339276 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 AGBL3Q8NEM8 1001 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 DPF2Q92785 391 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
SFN-201ENST00000339276 MYO3BQ8WXR4 1341 aa20.52■□□□□ 0.88
SFN-201ENST00000339276 IQCA1LA6NCM1 817 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 VEGFAP15692 232 aaPredicted RBP20.52■□□□□ 0.87
SFN-201ENST00000339276 SCARF1Q14162 830 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 MFSD14BQ5SR56 506 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 PI16Q6UXB8 463 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 SMC5Q8IY18 1101 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 MICALL2Q8IY33 904 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 DENND2AQ9ULE3 1009 aa20.52■□□□□ 0.87
SFN-201ENST00000339276 ZBTB22O15209 634 aa20.51■□□□□ 0.87
SFN-201ENST00000339276 MCAMP43121 646 aa20.51■□□□□ 0.87
SFN-201ENST00000339276 FKBP1AP62942 108 aaKnown RBP20.51■□□□□ 0.87
SFN-201ENST00000339276 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
SFN-201ENST00000339276 KIAA0825Q8IV33 1275 aa20.51■□□□□ 0.87
SFN-201ENST00000339276 TAF1DQ9H5J8 278 aaPredicted RBP20.51■□□□□ 0.87
SFN-201ENST00000339276 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
SFN-201ENST00000339276 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
SFN-201ENST00000339276 KIF3CO14782 793 aa20.5■□□□□ 0.87
SFN-201ENST00000339276 UQCRFS1P1P0C7P4 283 aa20.5■□□□□ 0.87
SFN-201ENST00000339276 EPHX2P34913 555 aa20.5■□□□□ 0.87
SFN-201ENST00000339276 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
SFN-201ENST00000339276 F8W031 263 aaPredicted RBP20.49■□□□□ 0.87
SFN-201ENST00000339276 USP17L8P0C7I0 530 aa20.49■□□□□ 0.87
SFN-201ENST00000339276 GRIK5Q16478 980 aa20.49■□□□□ 0.87
SFN-201ENST00000339276 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
SFN-201ENST00000339276 WDR66Q8TBY9 1149 aa20.49■□□□□ 0.87
SFN-201ENST00000339276 TBC1D22AQ8WUA7 517 aa20.49■□□□□ 0.87
SFN-201ENST00000339276 PDS5AQ29RF7 1337 aaKnown RBP20.48■□□□□ 0.87
SFN-201ENST00000339276 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
SFN-201ENST00000339276 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
SFN-201ENST00000339276 ZNF512BQ96KM6 892 aaPredicted RBP20.48■□□□□ 0.87
SFN-201ENST00000339276 SNRKQ9NRH2 765 aa20.48■□□□□ 0.87
SFN-201ENST00000339276 ADAMTSL1Q8N6G6 1762 aa20.47■□□□□ 0.87
SFN-201ENST00000339276 H7C1D1 291 aa20.47■□□□□ 0.87
SFN-201ENST00000339276 EGFRP00533 1210 aa20.47■□□□□ 0.87
SFN-201ENST00000339276 ZNF280AP59817 542 aaPredicted RBP20.47■□□□□ 0.87
SFN-201ENST00000339276 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
SFN-201ENST00000339276 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
SFN-201ENST00000339276 OTUD7AQ8TE49 926 aaPredicted RBP20.47■□□□□ 0.87
SFN-201ENST00000339276 ADARB2Q9NS39 739 aaKnown RBP20.47■□□□□ 0.87
SFN-201ENST00000339276 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
SFN-201ENST00000339276 SALL1Q9NSC2 1324 aa20.46■□□□□ 0.87
SFN-201ENST00000339276 TBC1D10BQ4KMP7 808 aaPredicted RBP20.46■□□□□ 0.87
SFN-201ENST00000339276 EAPPQ56P03 285 aaPredicted RBP20.46■□□□□ 0.87
SFN-201ENST00000339276 POTEIP0CG38 1075 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 POTEJP0CG39 1038 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 PRDX5P30044 214 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 ZAP70P43403 619 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
SFN-201ENST00000339276 OGFOD1Q8N543 542 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 TTF2Q9UNY4 1162 aaKnown RBP20.45■□□□□ 0.86
SFN-201ENST00000339276 NDUFB9Q9Y6M9 179 aa20.45■□□□□ 0.86
SFN-201ENST00000339276 NUCB1Q02818 461 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 KIF4BQ2VIQ3 1234 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 TSHZ3Q63HK5 1081 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 TBC1D9Q6ZT07 1266 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 USP50Q70EL3 339 aaPredicted RBP20.44■□□□□ 0.86
SFN-201ENST00000339276 MYOZ2Q9NPC6 264 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
SFN-201ENST00000339276 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
SFN-201ENST00000339276 PNMA8AQ86V59 439 aaPredicted RBP20.43■□□□□ 0.86
SFN-201ENST00000339276 CHD1LQ86WJ1 897 aa20.43■□□□□ 0.86
SFN-201ENST00000339276 ECHDC1Q9NTX5 307 aa20.43■□□□□ 0.86
SFN-201ENST00000339276 SUGT1Q9Y2Z0 365 aa20.43■□□□□ 0.86
SFN-201ENST00000339276 MYO5AQ9Y4I1 1855 aaKnown RBP20.42■□□□□ 0.86
SFN-201ENST00000339276 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
SFN-201ENST00000339276 LDHBP07195 334 aaKnown RBP20.42■□□□□ 0.86
SFN-201ENST00000339276 ATP5JP18859 108 aa20.42■□□□□ 0.86
SFN-201ENST00000339276 ZGPATQ8N5A5 531 aaKnown RBP20.42■□□□□ 0.86
SFN-201ENST00000339276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
SFN-201ENST00000339276 PCDHAC2Q9Y5I4 1007 aa20.42■□□□□ 0.86
SFN-201ENST00000339276 SALL3Q9BXA9 1300 aa20.42■□□□□ 0.86
SFN-201ENST00000339276 GPATCH3Q96I76 525 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms