RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CCDC85CA6NKD9 419 aa13.47□□□□□ -0.25
CAPN3-202ENST00000337571 WNT10BO00744 389 aa13.47□□□□□ -0.25
CAPN3-202ENST00000337571 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
CAPN3-202ENST00000337571 SLC10A3P09131 477 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 KLRK1P26718 216 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 DLGAP5Q15398 846 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 PRAMEF18Q5VWM3 479 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
CAPN3-202ENST00000337571 SAGE1Q9NXZ1 904 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
CAPN3-202ENST00000337571 CASP8AP2Q9UKL3 1982 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 MYO1BO43795 1136 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 TRPA1O75762 1119 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 SASH1O94885 1247 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 DGKZQ13574 1117 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 C15orf52Q6ZUT6 534 aaKnown RBP13.45□□□□□ -0.26
CAPN3-202ENST00000337571 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-202ENST00000337571 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
CAPN3-202ENST00000337571 SNAP23O00161 211 aa13.44□□□□□ -0.26
CAPN3-202ENST00000337571 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
CAPN3-202ENST00000337571 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
CAPN3-202ENST00000337571 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
CAPN3-202ENST00000337571 PAPPA2Q9BXP8 1791 aa13.43□□□□□ -0.26
CAPN3-202ENST00000337571 E9PSI1 815 aa13.43□□□□□ -0.26
CAPN3-202ENST00000337571 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-202ENST00000337571 IL1R1P14778 569 aa13.43□□□□□ -0.26
CAPN3-202ENST00000337571 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPN3-202ENST00000337571 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPN3-202ENST00000337571 MOB2Q70IA6 237 aa13.43□□□□□ -0.26
CAPN3-202ENST00000337571 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
CAPN3-202ENST00000337571 FKBP1AP62942 108 aaKnown RBP13.42□□□□□ -0.26
CAPN3-202ENST00000337571 PRKG1Q13976 671 aa13.42□□□□□ -0.26
CAPN3-202ENST00000337571 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
CAPN3-202ENST00000337571 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
CAPN3-202ENST00000337571 PTPRCP08575 1304 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 NBPF7P0C2Y1 421 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-202ENST00000337571 HIBADHP31937 336 aaKnown RBP13.41□□□□□ -0.26
CAPN3-202ENST00000337571 VPS37DQ86XT2 251 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
CAPN3-202ENST00000337571 MTMR14Q8NCE2 650 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
CAPN3-202ENST00000337571 ZNF646O15015 1829 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-202ENST00000337571 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
CAPN3-202ENST00000337571 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-202ENST00000337571 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-202ENST00000337571 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
CAPN3-202ENST00000337571 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
CAPN3-202ENST00000337571 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
CAPN3-202ENST00000337571 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
CAPN3-202ENST00000337571 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 GYG1P46976 350 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
CAPN3-202ENST00000337571 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-202ENST00000337571 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
CAPN3-202ENST00000337571 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-202ENST00000337571 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
CAPN3-202ENST00000337571 PPP2R3BQ9Y5P8 575 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 UTYO14607 1347 aa13.39□□□□□ -0.27
CAPN3-202ENST00000337571 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 TM4SF4P48230 202 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 PRMT6Q96LA8 375 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 PUS3Q9BZE2 481 aaKnown RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
CAPN3-202ENST00000337571 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
CAPN3-202ENST00000337571 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
CAPN3-202ENST00000337571 CLRN2A0PK11 232 aa13.37□□□□□ -0.27
CAPN3-202ENST00000337571 MLLT1Q03111 559 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-202ENST00000337571 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-202ENST00000337571 PDE8BO95263 885 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 INHBEP58166 350 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 TNFAIP1Q13829 316 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-202ENST00000337571 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
CAPN3-202ENST00000337571 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
CAPN3-202ENST00000337571 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
CAPN3-202ENST00000337571 RASA3Q14644 834 aa13.35□□□□□ -0.27
CAPN3-202ENST00000337571 LRRC24Q50LG9 513 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms