RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 ZNF396Q96N95 335 aaPredicted RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 B4E1Z4 1266 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 ZNF500O60304 480 aaPredicted RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 TPM2P07951 284 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 NPHP1O15259 732 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 ADD1P35611 737 aaKnown RBP11.36□□□□□ -0.59
MSL3-202ENST00000337339 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 ZNF592Q92610 1267 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 APPBP2Q92624 585 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 PHKBQ93100 1093 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 NRBP1Q9UHY1 535 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
MSL3-202ENST00000337339 DHX16O60231 1041 aaKnown RBP11.35□□□□□ -0.59
MSL3-202ENST00000337339 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
MSL3-202ENST00000337339 CTSWP56202 376 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 GPR108Q9NPR9 543 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 CIAO1O76071 339 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 LRMPQ12912 555 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 CCDC102BQ68D86 513 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 SMIM5Q71RC9 77 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 MAGEB6Q8N7X4 407 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 CLSTN2Q9H4D0 955 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 LRP2BPQ9P2M1 347 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 CAMTA1Q9Y6Y1 1673 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 ZFYP08048 801 aaPredicted RBP11.35□□□□□ -0.59
MSL3-202ENST00000337339 NAPBQ9H115 298 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
MSL3-202ENST00000337339 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 TDO2P48775 406 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
MSL3-202ENST00000337339 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
MSL3-202ENST00000337339 CPDO75976 1380 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 CHAF1AQ13111 956 aaPredicted RBP11.34□□□□□ -0.59
MSL3-202ENST00000337339 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
MSL3-202ENST00000337339 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSL3-202ENST00000337339 PIP4K2BP78356 416 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 SLC4A8Q2Y0W8 1093 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 CPLX2Q6PUV4 134 aaKnown RBP11.34□□□□□ -0.59
MSL3-202ENST00000337339 VPS37DQ86XT2 251 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
MSL3-202ENST00000337339 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSL3-202ENST00000337339 ELP1O95163 1332 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
MSL3-202ENST00000337339 PDE8BO95263 885 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 LLPHQ9BRT6 129 aaKnown RBP11.33□□□□□ -0.6
MSL3-202ENST00000337339 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 CLIC4Q9Y696 253 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 IFIT3O14879 490 aaKnown RBP11.33□□□□□ -0.6
MSL3-202ENST00000337339 MBD4O95243 580 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
MSL3-202ENST00000337339 C16orf45Q96MC5 204 aaPredicted RBP11.33□□□□□ -0.6
MSL3-202ENST00000337339 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
MSL3-202ENST00000337339 CYP19A1P11511 503 aaPredicted RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 BCAMP50895 628 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 TRIM29Q14134 588 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 ALDH8A1Q9H2A2 487 aaPredicted RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 PDE8AO60658 829 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 PDE6AP16499 860 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 ZNF274Q96GC6 653 aaPredicted RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 ALG1Q9BT22 464 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 PCDHA7Q9UN72 937 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 PRKAB2O43741 272 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 DDB1Q16531 1140 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
MSL3-202ENST00000337339 RAI14Q9P0K7 980 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
MSL3-202ENST00000337339 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
MSL3-202ENST00000337339 UBE2Q2LH0YL09 131 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 IGHMBP2P38935 993 aaKnown RBP11.31□□□□□ -0.6
MSL3-202ENST00000337339 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 SMC2O95347 1197 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 SLC5A1P13866 664 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 HSP90AA4PQ58FG1 418 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms