RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
EPHA3-201ENST00000336596 G2E3Q7L622 706 aa8.43□□□□□ -1.06
EPHA3-201ENST00000336596 ANKRD44Q8N8A2 993 aa8.43□□□□□ -1.06
EPHA3-201ENST00000336596 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
EPHA3-201ENST00000336596 TRIM5Q9C035 493 aa8.43□□□□□ -1.06
EPHA3-201ENST00000336596 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
EPHA3-201ENST00000336596 SERPINC1P01008 464 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 GNA11P29992 359 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 CCDC91Q7Z6B0 441 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 ZNF408Q9H9D4 720 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 CTAGE5O15320 804 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 HIBADHP31937 336 aaKnown RBP8.42□□□□□ -1.06
EPHA3-201ENST00000336596 ATP8B2P98198 1209 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 SLC8A3P57103 927 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 RTKN2Q8IZC4 609 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 C8orf76Q96K31 380 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 PODXL2Q9NZ53 605 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 HOXD10P28358 340 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 MCM5P33992 734 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
EPHA3-201ENST00000336596 PICALMQ13492 652 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 ADAMTS13Q76LX8 1427 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 KDM4AO75164 1064 aa8.42□□□□□ -1.06
EPHA3-201ENST00000336596 METTL22Q9BUU2 404 aaPredicted RBP8.42□□□□□ -1.06
EPHA3-201ENST00000336596 SPATA31D1Q6ZQQ2 1576 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 C1orf167Q5SNV9 1468 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 GOLIM4O00461 696 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 IFI16Q16666 785 aaKnown RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 SMCR8Q8TEV9 937 aaPredicted RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 TNNQ9UQP3 1299 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 DNM2P50570 870 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 TSNARE1Q96NA8 513 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 JCADQ9P266 1359 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 NEFHP12036 1026 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 FRMPD1Q5SYB0 1578 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 PLVAPQ9BX97 442 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 DALRD3Q5D0E6 543 aaKnown RBP8.41□□□□□ -1.06
EPHA3-201ENST00000336596 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 USP14P54578 494 aa8.41□□□□□ -1.06
EPHA3-201ENST00000336596 KCNQ3O43525 872 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 PPP1R2P41236 205 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 KMT5BQ4FZB7 885 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 TNMDQ9H2S6 317 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 RICTORQ6R327 1708 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 GIGYF1O75420 1035 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-201ENST00000336596 RLBP1P12271 317 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.06
EPHA3-201ENST00000336596 SPA17Q15506 151 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 CCDC93Q567U6 631 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 TSPY26PQ9H489 355 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 EXOC7Q9UPT5 735 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 PA2G4Q9UQ80 394 aaKnown RBP8.4□□□□□ -1.06
EPHA3-201ENST00000336596 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 DLC1Q96QB1 1528 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 USP19O94966 1318 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 TTC41PQ6P2S7 1318 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 PRPHP41219 470 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.06
EPHA3-201ENST00000336596 NLRX1Q86UT6 975 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 TEX11Q8IYF3 940 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 BACH2Q9BYV9 841 aa8.4□□□□□ -1.06
EPHA3-201ENST00000336596 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-201ENST00000336596 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.07
EPHA3-201ENST00000336596 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.07
EPHA3-201ENST00000336596 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.07
EPHA3-201ENST00000336596 UBA5Q9GZZ9 404 aa8.4□□□□□ -1.07
EPHA3-201ENST00000336596 AZI2Q9H6S1 392 aa8.4□□□□□ -1.07
EPHA3-201ENST00000336596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 F8W031 263 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 IGHDP01880 384 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 SLC27A3Q5K4L6 730 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 RSPH3Q86UC2 560 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 PLEKHF1Q96S99 279 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 PHACTR2O75167 634 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 STAMBPO95630 424 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 STK3Q13188 491 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 TAOK3Q9H2K8 898 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 BICC1Q9H694 974 aaKnown RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 NOP56O00567 594 aaKnown RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 NT5C2P49902 561 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 AFF2P51816 1311 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
EPHA3-201ENST00000336596 SIK1P57059 783 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 KIF4BQ2VIQ3 1234 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 TSHZ3Q63HK5 1081 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 CACNA2D4Q7Z3S7 1137 aa8.39□□□□□ -1.07
EPHA3-201ENST00000336596 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms