RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 PUM3Q15397 648 aaKnown RBP18.61■□□□□ 0.57
KATNA1-201ENST00000335643 C1orf115Q9H7X2 142 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 ZNF408Q9H9D4 720 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
KATNA1-201ENST00000335643 F8W031 263 aaPredicted RBP18.6■□□□□ 0.57
KATNA1-201ENST00000335643 WNT10BO00744 389 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 GNAI2P04899 355 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
KATNA1-201ENST00000335643 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
KATNA1-201ENST00000335643 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
KATNA1-201ENST00000335643 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 FAM205AQ6ZU69 1335 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 MYH13Q9UKX3 1938 aa18.6■□□□□ 0.57
KATNA1-201ENST00000335643 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 VEGFBP49765 207 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 GRIK5Q16478 980 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 OGFOD1Q8N543 542 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 AOX1Q06278 1338 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 ECM29Q5VYK3 1845 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
KATNA1-201ENST00000335643 ZBED3Q96IU2 234 aaPredicted RBP18.59■□□□□ 0.57
KATNA1-201ENST00000335643 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
KATNA1-201ENST00000335643 COL1A1P02452 1464 aaPredicted RBP18.59■□□□□ 0.57
KATNA1-201ENST00000335643 LPIN2Q92539 896 aa18.58■□□□□ 0.56
KATNA1-201ENST00000335643 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
KATNA1-201ENST00000335643 IL15P40933 162 aaPredicted RBP18.57■□□□□ 0.56
KATNA1-201ENST00000335643 FKBP1AP62942 108 aaKnown RBP18.57■□□□□ 0.56
KATNA1-201ENST00000335643 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
KATNA1-201ENST00000335643 IFIT1P09914 478 aaKnown RBP18.56■□□□□ 0.56
KATNA1-201ENST00000335643 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 MFSD14BQ5SR56 506 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 SAPCD2Q86UD0 394 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 VPS37DQ86XT2 251 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 CEP126Q9P2H0 1117 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 PITPNM2Q9BZ72 1349 aa18.56■□□□□ 0.56
KATNA1-201ENST00000335643 SLC5A1P13866 664 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
KATNA1-201ENST00000335643 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 SULF1Q8IWU6 871 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 HDAC9Q9UKV0 1011 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 THSD7BQ9C0I4 1608 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 ADORA1P30542 326 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 TFCP2Q12800 502 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 CYP4F22Q6NT55 531 aa18.55■□□□□ 0.56
KATNA1-201ENST00000335643 POLA2Q14181 598 aa18.54■□□□□ 0.56
KATNA1-201ENST00000335643 CFAP100Q494V2 611 aa18.54■□□□□ 0.56
KATNA1-201ENST00000335643 PRMT6Q96LA8 375 aaPredicted RBP18.54■□□□□ 0.56
KATNA1-201ENST00000335643 MMP14P50281 582 aa18.53■□□□□ 0.56
KATNA1-201ENST00000335643 TIMM10P62072 90 aa18.53■□□□□ 0.56
KATNA1-201ENST00000335643 MTMR14Q8NCE2 650 aa18.53■□□□□ 0.56
KATNA1-201ENST00000335643 TTF2Q9UNY4 1162 aaKnown RBP18.53■□□□□ 0.56
KATNA1-201ENST00000335643 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
KATNA1-201ENST00000335643 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 FRAT2O75474 233 aaPredicted RBP18.52■□□□□ 0.56
KATNA1-201ENST00000335643 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 PHKA1P46020 1223 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 ATP8B2P98198 1209 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 DLGAP5Q15398 846 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 SSH3Q8TE77 659 aa18.52■□□□□ 0.56
KATNA1-201ENST00000335643 GRM1Q13255 1194 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
KATNA1-201ENST00000335643 CAPNS2Q96L46 248 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 COG6Q9Y2V7 657 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 A0A1B0GUL7 405 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 CLRN2A0PK11 232 aa18.51■□□□□ 0.55
KATNA1-201ENST00000335643 HSPA1AP0DMV8 641 aaKnown RBP18.51■□□□□ 0.55
KATNA1-201ENST00000335643 HSPA1BP0DMV9 641 aaKnown RBP18.51■□□□□ 0.55
KATNA1-201ENST00000335643 GBA2Q9HCG7 927 aaPredicted RBP18.51■□□□□ 0.55
KATNA1-201ENST00000335643 HUNKP57058 714 aa18.5■□□□□ 0.55
KATNA1-201ENST00000335643 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
KATNA1-201ENST00000335643 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
KATNA1-201ENST00000335643 MOB2Q70IA6 237 aa18.5■□□□□ 0.55
KATNA1-201ENST00000335643 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
KATNA1-201ENST00000335643 PAPPA2Q9BXP8 1791 aa18.49■□□□□ 0.55
KATNA1-201ENST00000335643 AOC2O75106 756 aa18.49■□□□□ 0.55
KATNA1-201ENST00000335643 RBM5P52756 815 aaKnown RBP eCLIP18.49■□□□□ 0.55
KATNA1-201ENST00000335643 CCDC102BQ68D86 513 aa18.49■□□□□ 0.55
KATNA1-201ENST00000335643 SERPINA10Q9UK55 444 aa18.49■□□□□ 0.55
KATNA1-201ENST00000335643 CRKP46108 304 aa18.48■□□□□ 0.55
KATNA1-201ENST00000335643 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
KATNA1-201ENST00000335643 XAGE2Q96GT9 111 aa18.48■□□□□ 0.55
KATNA1-201ENST00000335643 HHIPL1Q96JK4 782 aa18.48■□□□□ 0.55
KATNA1-201ENST00000335643 SSC5DA1L4H1 1573 aa18.48■□□□□ 0.55
KATNA1-201ENST00000335643 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.55
KATNA1-201ENST00000335643 ZIC5Q96T25 663 aa18.47■□□□□ 0.55
KATNA1-201ENST00000335643 TDRD3Q9H7E2 651 aaKnown RBP18.47■□□□□ 0.55
KATNA1-201ENST00000335643 FZD1Q9UP38 647 aa18.47■□□□□ 0.55
KATNA1-201ENST00000335643 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
KATNA1-201ENST00000335643 APOBEC3FQ8IUX4 373 aaKnown RBP18.47■□□□□ 0.55
KATNA1-201ENST00000335643 C2orf69Q8N8R5 385 aa18.47■□□□□ 0.55
KATNA1-201ENST00000335643 DEFB129Q9H1M3 183 aa18.47■□□□□ 0.55
KATNA1-201ENST00000335643 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
KATNA1-201ENST00000335643 PRDX5P30044 214 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms