RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CYP2E1P05181 493 aaPredicted RBP26.15■■□□□ 1.78
TPM1-204ENST00000334895 KIAA2012Q0VF49 1180 aa26.15■■□□□ 1.78
TPM1-204ENST00000334895 CNTROBQ8N137 903 aa26.15■■□□□ 1.78
TPM1-204ENST00000334895 EVI5LQ96CN4 794 aa26.15■■□□□ 1.78
TPM1-204ENST00000334895 MYO5AQ9Y4I1 1855 aaKnown RBP26.15■■□□□ 1.78
TPM1-204ENST00000334895 COL4A5P29400 1685 aa26.15■■□□□ 1.78
TPM1-204ENST00000334895 AOC3Q16853 763 aa26.14■■□□□ 1.78
TPM1-204ENST00000334895 COA1Q9GZY4 146 aa26.14■■□□□ 1.78
TPM1-204ENST00000334895 ZNF277Q9NRM2 450 aaPredicted RBP26.14■■□□□ 1.78
TPM1-204ENST00000334895 DOK7Q18PE1 504 aa26.14■■□□□ 1.77
TPM1-204ENST00000334895 DENND2AQ9ULE3 1009 aa26.14■■□□□ 1.77
TPM1-204ENST00000334895 PDS5AQ29RF7 1337 aaKnown RBP26.13■■□□□ 1.77
TPM1-204ENST00000334895 C8orf34Q49A92 452 aa26.13■■□□□ 1.77
TPM1-204ENST00000334895 ARHGAP27Q6ZUM4 889 aa26.13■■□□□ 1.77
TPM1-204ENST00000334895 TAOK3Q9H2K8 898 aa26.13■■□□□ 1.77
TPM1-204ENST00000334895 DOCK2Q92608 1830 aa26.13■■□□□ 1.77
TPM1-204ENST00000334895 PIH1D3Q9NQM4 214 aaKnown RBP26.12■■□□□ 1.77
TPM1-204ENST00000334895 PPIP5K2O43314 1243 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 TBC1D9Q6ZT07 1266 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 KBTBD3Q8NAB2 608 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 DBNDD1Q9H9R9 158 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 JAG2Q9Y219 1238 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 LTBP3Q9NS15 1303 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 SCN9AQ15858 1988 aa26.11■■□□□ 1.77
TPM1-204ENST00000334895 FRAT2O75474 233 aaPredicted RBP26.1■■□□□ 1.77
TPM1-204ENST00000334895 DICER1Q9UPY3 1922 aaKnown RBP26.1■■□□□ 1.77
TPM1-204ENST00000334895 CHAF1AQ13111 956 aaPredicted RBP26.1■■□□□ 1.77
TPM1-204ENST00000334895 FSD1Q9BTV5 496 aa26.1■■□□□ 1.77
TPM1-204ENST00000334895 ZNF646O15015 1829 aaPredicted RBP26.09■■□□□ 1.77
TPM1-204ENST00000334895 CDC45O75419 566 aa26.09■■□□□ 1.77
TPM1-204ENST00000334895 PRELPP51888 382 aa26.09■■□□□ 1.77
TPM1-204ENST00000334895 RASSF7Q02833 373 aa26.09■■□□□ 1.77
TPM1-204ENST00000334895 VPS33BQ9H267 617 aa26.09■■□□□ 1.77
TPM1-204ENST00000334895 MYH7P12883 1935 aa26.08■■□□□ 1.77
TPM1-204ENST00000334895 ECE2O60344 883 aa26.08■■□□□ 1.77
TPM1-204ENST00000334895 CHGBP05060 677 aa26.08■■□□□ 1.77
TPM1-204ENST00000334895 IARSP41252 1262 aaKnown RBP26.08■■□□□ 1.77
TPM1-204ENST00000334895 CHMLP26374 656 aa26.07■■□□□ 1.76
TPM1-204ENST00000334895 TTF1Q15361 905 aaPredicted RBP26.07■■□□□ 1.76
TPM1-204ENST00000334895 PODNQ7Z5L7 613 aa26.07■■□□□ 1.76
TPM1-204ENST00000334895 KCNQ5Q9NR82 932 aa26.07■■□□□ 1.76
TPM1-204ENST00000334895 FAM205AQ6ZU69 1335 aa26.07■■□□□ 1.76
TPM1-204ENST00000334895 RFX7Q2KHR2 1363 aa26.07■■□□□ 1.76
TPM1-204ENST00000334895 LARGE2Q8N3Y3 721 aa26.06■■□□□ 1.76
TPM1-204ENST00000334895 TIAM2Q8IVF5 1701 aa26.05■■□□□ 1.76
TPM1-204ENST00000334895 YDJCA8MPS7 323 aa26.05■■□□□ 1.76
TPM1-204ENST00000334895 G3V3G9 751 aa26.05■■□□□ 1.76
TPM1-204ENST00000334895 DCAF8Q5TAQ9 597 aa26.05■■□□□ 1.76
TPM1-204ENST00000334895 SALL1Q9NSC2 1324 aa26.05■■□□□ 1.76
TPM1-204ENST00000334895 PSME4Q14997 1843 aa26.04■■□□□ 1.76
TPM1-204ENST00000334895 GTF2IP78347 998 aa26.04■■□□□ 1.76
TPM1-204ENST00000334895 SLFNL1Q499Z3 407 aa26.04■■□□□ 1.76
TPM1-204ENST00000334895 WDR66Q8TBY9 1149 aa26.04■■□□□ 1.76
TPM1-204ENST00000334895 IDH1O75874 414 aaKnown RBP26.03■■□□□ 1.76
TPM1-204ENST00000334895 ABCF2Q9UG63 623 aa26.03■■□□□ 1.76
TPM1-204ENST00000334895 GRIK5Q16478 980 aa26.03■■□□□ 1.76
TPM1-204ENST00000334895 IL25Q9H293 177 aa26.03■■□□□ 1.76
TPM1-204ENST00000334895 FAM227BQ96M60 508 aa26.02■■□□□ 1.76
TPM1-204ENST00000334895 BACH2Q9BYV9 841 aa26.02■■□□□ 1.76
TPM1-204ENST00000334895 PRDX5P30044 214 aa26.01■■□□□ 1.75
TPM1-204ENST00000334895 NMIQ13287 307 aaPredicted RBP26.01■■□□□ 1.75
TPM1-204ENST00000334895 TTLL5Q6EMB2 1281 aa26.01■■□□□ 1.75
TPM1-204ENST00000334895 TICAM2Q86XR7 235 aa26.01■■□□□ 1.75
TPM1-204ENST00000334895 DIAPH3Q9NSV4 1193 aa26.01■■□□□ 1.75
TPM1-204ENST00000334895 LRP2BPQ9P2M1 347 aa26.01■■□□□ 1.75
TPM1-204ENST00000334895 MAST2Q6P0Q8 1798 aa26■■□□□ 1.75
TPM1-204ENST00000334895 A0A0D9SFI3 127 aa26■■□□□ 1.75
TPM1-204ENST00000334895 RNF113AO15541 343 aaKnown RBP26■■□□□ 1.75
TPM1-204ENST00000334895 NIM1KQ8IY84 436 aa26■■□□□ 1.75
TPM1-204ENST00000334895 CERS5Q8N5B7 392 aa26■■□□□ 1.75
TPM1-204ENST00000334895 ZNF384Q8TF68 577 aa26■■□□□ 1.75
TPM1-204ENST00000334895 MXD3Q9BW11 206 aa26■■□□□ 1.75
TPM1-204ENST00000334895 SEC24BO95487 1268 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 PDE6AP16499 860 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 ADD2P35612 726 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 MFSD14BQ5SR56 506 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 SLC9C2Q5TAH2 1124 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 CWC27Q6UX04 472 aaKnown RBP25.99■■□□□ 1.75
TPM1-204ENST00000334895 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.99■■□□□ 1.75
TPM1-204ENST00000334895 ZNRF3Q9ULT6 936 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 TCRBV5S4A2TA0A5A2 114 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 HIP1O00291 1037 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 MAP3K12Q12852 859 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 DACT2Q5SW24 774 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 ZGPATQ8N5A5 531 aaKnown RBP25.99■■□□□ 1.75
TPM1-204ENST00000334895 TBC1D22AQ8WUA7 517 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 FBXW7Q969H0 707 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 RAI14Q9P0K7 980 aa25.99■■□□□ 1.75
TPM1-204ENST00000334895 ZMYM1Q5SVZ6 1142 aa25.98■■□□□ 1.75
TPM1-204ENST00000334895 STRIP1Q5VSL9 837 aa25.98■■□□□ 1.75
TPM1-204ENST00000334895 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
TPM1-204ENST00000334895 MAGEB6Q8N7X4 407 aa25.98■■□□□ 1.75
TPM1-204ENST00000334895 ESYT1Q9BSJ8 1104 aa25.98■■□□□ 1.75
TPM1-204ENST00000334895 USP17L3A6NCW0 530 aa25.97■■□□□ 1.75
TPM1-204ENST00000334895 USP17L4A6NCW7 530 aa25.97■■□□□ 1.75
TPM1-204ENST00000334895 ZFYP08048 801 aaPredicted RBP25.97■■□□□ 1.75
TPM1-204ENST00000334895 CASC1Q6TDU7 716 aa25.97■■□□□ 1.75
TPM1-204ENST00000334895 USP17L1Q7RTZ2 530 aa25.97■■□□□ 1.75
TPM1-204ENST00000334895 SEC62Q99442 399 aaKnown RBP25.97■■□□□ 1.75
TPM1-204ENST00000334895 ZNF532Q9HCE3 1301 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms