RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 UBE4AQ14139 1066 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 DALRD3Q5D0E6 543 aaKnown RBP13.83□□□□□ -0.2
HDAC6-201ENST00000334136 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 PIM2Q9P1W9 311 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 ZNF804BA4D1E1 1349 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 MYO1BO43795 1136 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 GYG1P46976 350 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 IMMTQ16891 758 aaKnown RBP13.83□□□□□ -0.2
HDAC6-201ENST00000334136 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-201ENST00000334136 SDF4Q9BRK5 362 aa13.83□□□□□ -0.2
HDAC6-201ENST00000334136 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 ZSCAN23Q3MJ62 389 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 CCDC73Q6ZRK6 1079 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 WDR66Q8TBY9 1149 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 STK3Q13188 491 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 CC2D2BQ6DHV5 1058 aa13.82□□□□□ -0.2
HDAC6-201ENST00000334136 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-201ENST00000334136 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
HDAC6-201ENST00000334136 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-201ENST00000334136 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-201ENST00000334136 NTSR2O95665 410 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 BCAMP50895 628 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
HDAC6-201ENST00000334136 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
HDAC6-201ENST00000334136 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-201ENST00000334136 C21orf2O43822 256 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 GTF2IP78347 998 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 MTX1Q13505 466 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 LETM1O95202 739 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-201ENST00000334136 CAMK4Q16566 473 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 MKNK2Q9HBH9 465 aa13.8□□□□□ -0.2
HDAC6-201ENST00000334136 CHRNA5P30532 468 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 POLA2Q14181 598 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 FOXO4P98177 505 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 SPATA5Q8NB90 893 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 NDUFB9Q9Y6M9 179 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 ZAP70P43403 619 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 KRT32Q14532 448 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 MTFR1LQ9H019 292 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 ZNF213O14771 459 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
HDAC6-201ENST00000334136 GOLGA6L1Q8N7Z2 621 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
HDAC6-201ENST00000334136 UBN2Q6ZU65 1347 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 ATP5JP18859 108 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-201ENST00000334136 SF3B3Q15393 1217 aaKnown RBP13.78□□□□□ -0.2
HDAC6-201ENST00000334136 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-201ENST00000334136 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
HDAC6-201ENST00000334136 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 PHKA1P46020 1223 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
HDAC6-201ENST00000334136 MAGEB6P1A0A0J9YX57 407 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 KDM4AO75164 1064 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 ADORA1P30542 326 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 TTLL5Q6EMB2 1281 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 MINPP1Q9UNW1 487 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 SLC4A4Q9Y6R1 1079 aa13.77□□□□□ -0.2
HDAC6-201ENST00000334136 SASH1O94885 1247 aa13.77□□□□□ -0.21
HDAC6-201ENST00000334136 TPM3P06753 285 aa13.77□□□□□ -0.21
HDAC6-201ENST00000334136 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
HDAC6-201ENST00000334136 RTKN2Q8IZC4 609 aa13.77□□□□□ -0.21
HDAC6-201ENST00000334136 VEZTQ9HBM0 779 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms