RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 MMP14P50281 582 aa25.21■■□□□ 1.63
MRPL40-201ENST00000333130 MICALL2Q8IY33 904 aa25.21■■□□□ 1.63
MRPL40-201ENST00000333130 OGFOD1Q8N543 542 aa25.21■■□□□ 1.63
MRPL40-201ENST00000333130 XAGE2Q96GT9 111 aa25.21■■□□□ 1.63
MRPL40-201ENST00000333130 FAM205AQ6ZU69 1335 aa25.21■■□□□ 1.63
MRPL40-201ENST00000333130 SEMA3EO15041 775 aa25.2■■□□□ 1.63
MRPL40-201ENST00000333130 TOMM70O94826 608 aa25.2■■□□□ 1.63
MRPL40-201ENST00000333130 FKBP1AP62942 108 aaKnown RBP25.2■■□□□ 1.63
MRPL40-201ENST00000333130 EAPPQ56P03 285 aaPredicted RBP25.2■■□□□ 1.63
MRPL40-201ENST00000333130 RHPN1Q8TCX5 695 aa25.2■■□□□ 1.63
MRPL40-201ENST00000333130 TBC1D22AQ8WUA7 517 aa25.2■■□□□ 1.63
MRPL40-201ENST00000333130 IQSEC3Q9UPP2 1182 aaPredicted RBP25.2■■□□□ 1.63
MRPL40-201ENST00000333130 APBB1O00213 710 aa25.19■■□□□ 1.62
MRPL40-201ENST00000333130 EPS15P42566 896 aa25.19■■□□□ 1.62
MRPL40-201ENST00000333130 USP50Q70EL3 339 aaPredicted RBP25.19■■□□□ 1.62
MRPL40-201ENST00000333130 CLASRPQ8N2M8 674 aaKnown RBP25.19■■□□□ 1.62
MRPL40-201ENST00000333130 RWDD1Q9H446 243 aaPredicted RBP25.19■■□□□ 1.62
MRPL40-201ENST00000333130 HDAC9Q9UKV0 1011 aa25.19■■□□□ 1.62
MRPL40-201ENST00000333130 IGHDP01880 384 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 USP17L8P0C7I0 530 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 ADORA1P30542 326 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 CHAF1AQ13111 956 aaPredicted RBP25.18■■□□□ 1.62
MRPL40-201ENST00000333130 CCDC102BQ68D86 513 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 DENND2AQ9ULE3 1009 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 PHKA1P46020 1223 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 CCDC158Q5M9N0 1113 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 MFSD14BQ5SR56 506 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 ERICH6BQ5W0A0 696 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 GCC1Q96CN9 775 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
MRPL40-201ENST00000333130 LDHDQ86WU2 507 aa25.17■■□□□ 1.62
MRPL40-201ENST00000333130 RBM46Q8TBY0 533 aaKnown RBP25.17■■□□□ 1.62
MRPL40-201ENST00000333130 WDR66Q8TBY9 1149 aa25.17■■□□□ 1.62
MRPL40-201ENST00000333130 GMLQ99445 158 aa25.17■■□□□ 1.62
MRPL40-201ENST00000333130 JAG2Q9Y219 1238 aa25.17■■□□□ 1.62
MRPL40-201ENST00000333130 UQCRFS1P1P0C7P4 283 aa25.16■■□□□ 1.62
MRPL40-201ENST00000333130 AACSQ86V21 672 aa25.16■■□□□ 1.62
MRPL40-201ENST00000333130 SMC5Q8IY18 1101 aa25.16■■□□□ 1.62
MRPL40-201ENST00000333130 SMC1BQ8NDV3 1235 aa25.16■■□□□ 1.62
MRPL40-201ENST00000333130 ZBTB47Q9UFB7 747 aaPredicted RBP25.16■■□□□ 1.62
MRPL40-201ENST00000333130 CLEC11AQ9Y240 323 aa25.16■■□□□ 1.62
MRPL40-201ENST00000333130 ZBTB22O15209 634 aa25.15■■□□□ 1.62
MRPL40-201ENST00000333130 TTC39AQ5SRH9 613 aa25.15■■□□□ 1.62
MRPL40-201ENST00000333130 KIAA0825Q8IV33 1275 aa25.15■■□□□ 1.62
MRPL40-201ENST00000333130 MXD3Q9BW11 206 aa25.15■■□□□ 1.62
MRPL40-201ENST00000333130 IL1RAPL2Q9NP60 686 aa25.15■■□□□ 1.62
MRPL40-201ENST00000333130 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.61
MRPL40-201ENST00000333130 PDS5AQ29RF7 1337 aaKnown RBP25.14■■□□□ 1.61
MRPL40-201ENST00000333130 ADAMTSL1Q8N6G6 1762 aa25.13■■□□□ 1.61
MRPL40-201ENST00000333130 ZNF280AP59817 542 aaPredicted RBP25.13■■□□□ 1.61
MRPL40-201ENST00000333130 KIF4BQ2VIQ3 1234 aa25.13■■□□□ 1.61
MRPL40-201ENST00000333130 ZGPATQ8N5A5 531 aaKnown RBP25.13■■□□□ 1.61
MRPL40-201ENST00000333130 EAF2Q96CJ1 260 aaPredicted RBP25.13■■□□□ 1.61
MRPL40-201ENST00000333130 DBNDD2Q9BQY9 259 aa25.13■■□□□ 1.61
MRPL40-201ENST00000333130 SUGT1Q9Y2Z0 365 aa25.13■■□□□ 1.61
MRPL40-201ENST00000333130 MAST3O60307 1309 aa25.13■■□□□ 1.61
MRPL40-201ENST00000333130 FSTL1Q12841 308 aa25.12■■□□□ 1.61
MRPL40-201ENST00000333130 TBC1D10BQ4KMP7 808 aaPredicted RBP25.12■■□□□ 1.61
MRPL40-201ENST00000333130 CCDC8Q9H0W5 538 aaPredicted RBP25.12■■□□□ 1.61
MRPL40-201ENST00000333130 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
MRPL40-201ENST00000333130 MYOZ2Q9NPC6 264 aa25.12■■□□□ 1.61
MRPL40-201ENST00000333130 ARID4AP29374 1257 aaPredicted RBP25.11■■□□□ 1.61
MRPL40-201ENST00000333130 RASGRF1Q13972 1273 aa25.11■■□□□ 1.61
MRPL40-201ENST00000333130 CHADLQ6NUI6 762 aa25.11■■□□□ 1.61
MRPL40-201ENST00000333130 CERS5Q8N5B7 392 aa25.11■■□□□ 1.61
MRPL40-201ENST00000333130 DBNLQ9UJU6 430 aaKnown RBP25.11■■□□□ 1.61
MRPL40-201ENST00000333130 SHTN1A0MZ66 631 aa25.1■■□□□ 1.61
MRPL40-201ENST00000333130 F8W031 263 aaPredicted RBP25.1■■□□□ 1.61
MRPL40-201ENST00000333130 RBM26Q5T8P6 1007 aaKnown RBP25.1■■□□□ 1.61
MRPL40-201ENST00000333130 SAMD7Q7Z3H4 446 aa25.1■■□□□ 1.61
MRPL40-201ENST00000333130 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
MRPL40-201ENST00000333130 ZC3H15Q8WU90 426 aaKnown RBP25.1■■□□□ 1.61
MRPL40-201ENST00000333130 ECM29Q5VYK3 1845 aa25.1■■□□□ 1.61
MRPL40-201ENST00000333130 COL1A1P02452 1464 aaPredicted RBP25.1■■□□□ 1.61
MRPL40-201ENST00000333130 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
MRPL40-201ENST00000333130 TTF2Q9UNY4 1162 aaKnown RBP25.09■■□□□ 1.61
MRPL40-201ENST00000333130 SALL1Q9NSC2 1324 aa25.09■■□□□ 1.61
MRPL40-201ENST00000333130 SMARCA5O60264 1052 aaPredicted RBP25.08■■□□□ 1.61
MRPL40-201ENST00000333130 SPATA5Q8NB90 893 aa25.08■■□□□ 1.61
MRPL40-201ENST00000333130 ZNF512BQ96KM6 892 aaPredicted RBP25.08■■□□□ 1.61
MRPL40-201ENST00000333130 POTEIP0CG38 1075 aa25.07■■□□□ 1.6
MRPL40-201ENST00000333130 POTEJP0CG39 1038 aa25.07■■□□□ 1.6
MRPL40-201ENST00000333130 SPTY2D1Q68D10 685 aaPredicted RBP25.07■■□□□ 1.6
MRPL40-201ENST00000333130 TLR7Q9NYK1 1049 aaKnown RBP25.07■■□□□ 1.6
MRPL40-201ENST00000333130 LDHBP07195 334 aaKnown RBP25.06■■□□□ 1.6
MRPL40-201ENST00000333130 RBM5P52756 815 aaKnown RBP eCLIP25.06■■□□□ 1.6
MRPL40-201ENST00000333130 DLGAP5Q15398 846 aa25.06■■□□□ 1.6
MRPL40-201ENST00000333130 GPATCH3Q96I76 525 aa25.06■■□□□ 1.6
MRPL40-201ENST00000333130 MYO1BO43795 1136 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 C1QTNF8P60827 252 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 HMG20BQ9P0W2 317 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 SERPINA10Q9UK55 444 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 POLR2AP24928 1970 aaKnown RBP25.05■■□□□ 1.6
MRPL40-201ENST00000333130 MCAMP43121 646 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 HDLBPQ00341 1268 aaKnown RBP25.05■■□□□ 1.6
MRPL40-201ENST00000333130 TEKT1Q969V4 418 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 DCPSQ96C86 337 aaKnown RBP25.05■■□□□ 1.6
MRPL40-201ENST00000333130 ABCF2Q9UG63 623 aa25.05■■□□□ 1.6
MRPL40-201ENST00000333130 HIRAP54198 1017 aaPredicted RBP25.04■■□□□ 1.6
MRPL40-201ENST00000333130 NUCB1Q02818 461 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms