RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PDLIM2Q96JY6 352 aa20.52■□□□□ 0.88
DDX28-201ENST00000332395 PIH1D3Q9NQM4 214 aaKnown RBP20.52■□□□□ 0.88
DDX28-201ENST00000332395 KCNQ2O43526 872 aa20.52■□□□□ 0.88
DDX28-201ENST00000332395 FBXL16Q8N461 479 aa20.52■□□□□ 0.88
DDX28-201ENST00000332395 MPHOSPH8Q99549 860 aa20.52■□□□□ 0.88
DDX28-201ENST00000332395 NIP7Q9Y221 180 aaKnown RBP eCLIP20.52■□□□□ 0.88
DDX28-201ENST00000332395 H3BQV1 296 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 IDH1O75874 414 aaKnown RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 IFFO2Q5TF58 517 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 ZNF274Q96GC6 653 aaPredicted RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 SCAND2PQ9GZW5 306 aaPredicted RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 MYO5AQ9Y4I1 1855 aaKnown RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 NTSR2O95665 410 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 PDIA3P30101 505 aaKnown RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
DDX28-201ENST00000332395 UBE3CQ15386 1083 aa20.51■□□□□ 0.87
DDX28-201ENST00000332395 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
DDX28-201ENST00000332395 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
DDX28-201ENST00000332395 SLC5A1P13866 664 aa20.5■□□□□ 0.87
DDX28-201ENST00000332395 RESTQ13127 1097 aa20.5■□□□□ 0.87
DDX28-201ENST00000332395 CCDC152Q4G0S7 254 aa20.5■□□□□ 0.87
DDX28-201ENST00000332395 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
DDX28-201ENST00000332395 LAMB2P55268 1798 aa20.5■□□□□ 0.87
DDX28-201ENST00000332395 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
DDX28-201ENST00000332395 ZNF213O14771 459 aa20.49■□□□□ 0.87
DDX28-201ENST00000332395 TOM1O60784 492 aa20.49■□□□□ 0.87
DDX28-201ENST00000332395 EVCP57679 992 aa20.49■□□□□ 0.87
DDX28-201ENST00000332395 MB21D2Q8IYB1 491 aaPredicted RBP20.49■□□□□ 0.87
DDX28-201ENST00000332395 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
DDX28-201ENST00000332395 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
DDX28-201ENST00000332395 PDE6AP16499 860 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
DDX28-201ENST00000332395 TFIP11Q9UBB9 837 aaKnown RBP20.48■□□□□ 0.87
DDX28-201ENST00000332395 KIF3AQ9Y496 699 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 ZNF532Q9HCE3 1301 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 SALL1Q9NSC2 1324 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 SNAP23O00161 211 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 MCM5P33992 734 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
DDX28-201ENST00000332395 NCOA7Q8NI08 942 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
DDX28-201ENST00000332395 PRC1O43663 620 aa20.47■□□□□ 0.87
DDX28-201ENST00000332395 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
DDX28-201ENST00000332395 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
DDX28-201ENST00000332395 SPATA5Q8NB90 893 aa20.47■□□□□ 0.87
DDX28-201ENST00000332395 LEO1Q8WVC0 666 aaPredicted RBP20.47■□□□□ 0.87
DDX28-201ENST00000332395 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
DDX28-201ENST00000332395 GPHNQ9NQX3 736 aaPredicted RBP20.47■□□□□ 0.87
DDX28-201ENST00000332395 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
DDX28-201ENST00000332395 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
DDX28-201ENST00000332395 RALYLQ86SE5 291 aaKnown RBP20.46■□□□□ 0.87
DDX28-201ENST00000332395 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
DDX28-201ENST00000332395 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
DDX28-201ENST00000332395 GIMAP6Q6P9H5 292 aa20.46■□□□□ 0.87
DDX28-201ENST00000332395 ANTXR2P58335 489 aa20.45■□□□□ 0.86
DDX28-201ENST00000332395 HS1BP3Q53T59 392 aa20.45■□□□□ 0.86
DDX28-201ENST00000332395 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
DDX28-201ENST00000332395 NBPF3Q9H094 633 aa20.45■□□□□ 0.86
DDX28-201ENST00000332395 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 GOLGA6L4A6NEF3 574 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 CLEC4GQ6UXB4 293 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 FUCA2Q9BTY2 467 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 APPP05067 770 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 LIG1P18858 919 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 FOSBP53539 338 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 AIDAQ96BJ3 306 aa20.44■□□□□ 0.86
DDX28-201ENST00000332395 CARMIL3Q8ND23 1372 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 KLF18A0A0U1RQI7 1052 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 MAP3K12Q12852 859 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 UVSSAQ2YD98 709 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 ZSCAN30Q86W11 494 aa20.43■□□□□ 0.86
DDX28-201ENST00000332395 STRBPQ96SI9 672 aaKnown RBP20.43■□□□□ 0.86
DDX28-201ENST00000332395 TPM2P07951 284 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 TRDNQ13061 729 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 TBC1D10CQ8IV04 446 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 C8orf37Q96NL8 207 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 CFAP45Q9UL16 551 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 MYH15Q9Y2K3 1946 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 BCL9LQ86UU0 1499 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 GOLGA8BA8MQT2 603 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 CHRNDQ07001 517 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 VPS72Q15906 364 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 MAGEB6Q8N7X4 407 aa20.42■□□□□ 0.86
DDX28-201ENST00000332395 FDPSP14324 419 aaKnown RBP20.41■□□□□ 0.86
DDX28-201ENST00000332395 BCAMP50895 628 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 NGLY1Q96IV0 654 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 PKNOX2Q96KN3 472 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 NUP62CLQ9H1M0 184 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 HPS5Q9UPZ3 1129 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 COL4A1P02462 1669 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 PGBD1Q96JS3 809 aa20.41■□□□□ 0.86
DDX28-201ENST00000332395 CDC5LQ99459 802 aaKnown RBP20.41■□□□□ 0.86
DDX28-201ENST00000332395 DHX16O60231 1041 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms