RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SNRKQ9NRH2 765 aa19.91■□□□□ 0.78
PRKCD-201ENST00000330452 DBNLQ9UJU6 430 aaKnown RBP19.91■□□□□ 0.78
PRKCD-201ENST00000330452 PSMA5P28066 241 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 TFCP2Q12800 502 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 BIRC2Q13490 618 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 LARP1BQ659C4 914 aaKnown RBP19.9■□□□□ 0.78
PRKCD-201ENST00000330452 FAM173BQ6P4H8 233 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 BLOC1S2Q6QNY1 142 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 ZCRB1Q8TBF4 217 aaKnown RBP19.9■□□□□ 0.78
PRKCD-201ENST00000330452 WDR17Q8IZU2 1322 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 ADAMTS7Q9UKP4 1686 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 NBPF9Q3BBW0 867 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 NBPF10Q6P3W6 841 aaKnown RBP19.9■□□□□ 0.78
PRKCD-201ENST00000330452 NBPF11Q86T75 865 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 MED23Q9ULK4 1368 aa19.9■□□□□ 0.78
PRKCD-201ENST00000330452 ADAMTS2O95450 1211 aa19.89■□□□□ 0.78
PRKCD-201ENST00000330452 RFX5P48382 616 aaPredicted RBP19.89■□□□□ 0.78
PRKCD-201ENST00000330452 PTPN12Q05209 780 aaKnown RBP19.89■□□□□ 0.78
PRKCD-201ENST00000330452 CDC37L1Q7L3B6 337 aa19.89■□□□□ 0.78
PRKCD-201ENST00000330452 RPAINQ86UA6 219 aa19.89■□□□□ 0.78
PRKCD-201ENST00000330452 A1BGP04217 495 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 SNRPA1P09661 255 aaKnown RBP19.89■□□□□ 0.77
PRKCD-201ENST00000330452 LRMPQ12912 555 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 STK3Q13188 491 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 IQUBQ8NA54 791 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 CEP89Q96ST8 783 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 RNF20Q5VTR2 975 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 COPRSQ9NQ92 184 aa19.89■□□□□ 0.77
PRKCD-201ENST00000330452 TAF5LO75529 589 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 RPS6KB1P23443 525 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 CLCN6P51797 869 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 TOB2Q14106 344 aaPredicted RBP19.88■□□□□ 0.77
PRKCD-201ENST00000330452 TPD52L1Q16890 204 aaPredicted RBP19.88■□□□□ 0.77
PRKCD-201ENST00000330452 TNNI3KQ59H18 835 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 FPGT-TNNI3KV9GXZ4 949 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 BORCS6Q96GS4 357 aa19.88■□□□□ 0.77
PRKCD-201ENST00000330452 COL15A1P39059 1388 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 MAP9Q49MG5 647 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 NPHP1O15259 732 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 SEC62Q99442 399 aaKnown RBP19.87■□□□□ 0.77
PRKCD-201ENST00000330452 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
PRKCD-201ENST00000330452 A0A087WZG4 1122 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 CCDC196A0A1B0GTZ2 297 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 MMS22LQ6ZRQ5 1243 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
PRKCD-201ENST00000330452 ATP5JP18859 108 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 C11orf91Q3C1V1 193 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 TTC6Q86TZ1 520 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 PPM1EQ8WY54 764 aa19.86■□□□□ 0.77
PRKCD-201ENST00000330452 SCN11AQ9UI33 1791 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 IL2RBP14784 551 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 TRDNQ13061 729 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 REXO1L1PQ8IX06 675 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 FMNL2Q96PY5 1086 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 FUCA2Q9BTY2 467 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 EIF3CLB5ME19 914 aaKnown RBP19.85■□□□□ 0.77
PRKCD-201ENST00000330452 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 EIF3CQ99613 913 aaKnown RBP19.85■□□□□ 0.77
PRKCD-201ENST00000330452 UBXN6Q9BZV1 441 aa19.85■□□□□ 0.77
PRKCD-201ENST00000330452 CPDO75976 1380 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 ZRANB2O95218 330 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 SLU7O95391 586 aaKnown RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 CCDC186Q7Z3E2 898 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 NBPF15Q8N660 670 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 ZBTB3Q9H5J0 574 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 ZCCHC17Q9NP64 241 aaKnown RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 COL5A2P05997 1499 aaPredicted RBP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 MRC1P22897 1456 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 ANKRD1Q15327 319 aa19.84■□□□□ 0.77
PRKCD-201ENST00000330452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRKCD-201ENST00000330452 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.77
PRKCD-201ENST00000330452 DDX46Q7L014 1031 aaKnown RBP19.83■□□□□ 0.77
PRKCD-201ENST00000330452 TTC36A6NLP5 189 aa19.83■□□□□ 0.76
PRKCD-201ENST00000330452 SSR1P43307 286 aaKnown RBP19.83■□□□□ 0.76
PRKCD-201ENST00000330452 HMG20BQ9P0W2 317 aa19.83■□□□□ 0.76
PRKCD-201ENST00000330452 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.76
PRKCD-201ENST00000330452 JCADQ9P266 1359 aa19.83■□□□□ 0.76
PRKCD-201ENST00000330452 KRT85P78386 507 aa19.82■□□□□ 0.76
PRKCD-201ENST00000330452 LMBR1LQ6UX01 489 aa19.82■□□□□ 0.76
PRKCD-201ENST00000330452 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
PRKCD-201ENST00000330452 KLHL33A6NCF5 533 aa19.82■□□□□ 0.76
PRKCD-201ENST00000330452 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
PRKCD-201ENST00000330452 ZNF609O15014 1411 aa19.82■□□□□ 0.76
PRKCD-201ENST00000330452 KIF3CO14782 793 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 JAK2O60674 1132 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 ACTN2P35609 894 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 ERCC6LQ2NKX8 1250 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 USPL1Q5W0Q7 1092 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 AK7Q96M32 723 aa19.81■□□□□ 0.76
PRKCD-201ENST00000330452 GOLGB1Q14789 3259 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms