RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 OTOFQ9HC10 1997 aa19.4■□□□□ 0.7
CTHRC1-201ENST00000330295 CCL15-CCL14A0A0B4J2E2 113 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 CCL15Q16663 113 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 LRIT3Q3SXY7 679 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 GDF15Q99988 308 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 RNF208Q9H0X6 261 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 ELP3Q9H9T3 547 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 MED23Q9ULK4 1368 aa19.39■□□□□ 0.69
CTHRC1-201ENST00000330295 TLR2O60603 784 aa19.38■□□□□ 0.69
CTHRC1-201ENST00000330295 GRK4P32298 578 aa19.38■□□□□ 0.69
CTHRC1-201ENST00000330295 NBPF12Q5TAG4 269 aaPredicted RBP19.38■□□□□ 0.69
CTHRC1-201ENST00000330295 U2AF1L4Q8WU68 220 aaKnown RBP19.38■□□□□ 0.69
CTHRC1-201ENST00000330295 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
CTHRC1-201ENST00000330295 ZNF804BA4D1E1 1349 aa19.37■□□□□ 0.69
CTHRC1-201ENST00000330295 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
CTHRC1-201ENST00000330295 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
CTHRC1-201ENST00000330295 GTF2A2P52657 109 aa19.36■□□□□ 0.69
CTHRC1-201ENST00000330295 SRRDQ9UH36 339 aa19.36■□□□□ 0.69
CTHRC1-201ENST00000330295 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
CTHRC1-201ENST00000330295 RIPOR2Q9Y4F9 1068 aa19.36■□□□□ 0.69
CTHRC1-201ENST00000330295 COL9A1P20849 921 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 BCAMP50895 628 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 DLGAP5Q15398 846 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 PLBD2Q8NHP8 589 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 RAET1EQ8TD07 263 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 COA1Q9GZY4 146 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 ALPK3Q96L96 1907 aa19.35■□□□□ 0.69
CTHRC1-201ENST00000330295 RPTORQ8N122 1335 aa19.34■□□□□ 0.69
CTHRC1-201ENST00000330295 CCDC152Q4G0S7 254 aa19.34■□□□□ 0.69
CTHRC1-201ENST00000330295 TTLL5Q6EMB2 1281 aa19.34■□□□□ 0.69
CTHRC1-201ENST00000330295 ECM2O94769 699 aaPredicted RBP19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 UBXN2AP68543 259 aa19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 ANKRD18AQ8IVF6 992 aa19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 MTMR14Q8NCE2 650 aa19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 TRIM47Q96LD4 638 aa19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 BIN2Q9UBW5 565 aaPredicted RBP19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 TTC28Q96AY4 2481 aa19.33■□□□□ 0.68
CTHRC1-201ENST00000330295 SGPL1O95470 568 aa19.32■□□□□ 0.68
CTHRC1-201ENST00000330295 HOXD10P28358 340 aa19.32■□□□□ 0.68
CTHRC1-201ENST00000330295 CTGFP29279 349 aa19.32■□□□□ 0.68
CTHRC1-201ENST00000330295 CLRN2A0PK11 232 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 NEFMP07197 916 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 HSP90B1P14625 803 aaKnown RBP19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 OSBPP22059 807 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 PSMC4P43686 418 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 TRIM28Q13263 835 aaKnown RBP19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 TDHQ8IZJ6 230 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 VEZTQ9HBM0 779 aa19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 ZCCHC17Q9NP64 241 aaKnown RBP19.31■□□□□ 0.68
CTHRC1-201ENST00000330295 MYO1BO43795 1136 aa19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 HELBQ8NG08 1087 aaPredicted RBP19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 UNC93B1Q9H1C4 597 aa19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
CTHRC1-201ENST00000330295 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
CTHRC1-201ENST00000330295 RASA3Q14644 834 aa19.29■□□□□ 0.68
CTHRC1-201ENST00000330295 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
CTHRC1-201ENST00000330295 GUCD1Q96NT3 240 aa19.29■□□□□ 0.68
CTHRC1-201ENST00000330295 CAPN2P17655 700 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 GTF2IP78347 998 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 VGLL4Q14135 290 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 C17orf99Q6UX52 265 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 CHPF2Q9P2E5 772 aa19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 ZMYND8Q9ULU4 1186 aaPredicted RBP19.28■□□□□ 0.68
CTHRC1-201ENST00000330295 SPDYE2BA6NHP3 402 aa19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 BTBD19C9JJ37 291 aa19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 SPDYE6P0CI01 402 aa19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 CETPP11597 493 aa19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 MINPP1Q9UNW1 487 aa19.27■□□□□ 0.68
CTHRC1-201ENST00000330295 PDE8AO60658 829 aa19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 TFRCP02786 760 aaKnown RBP19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 C7orf61Q8IZ16 206 aa19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 SLAIN1Q8ND83 568 aa19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 PRMT6Q96LA8 375 aaPredicted RBP19.26■□□□□ 0.67
CTHRC1-201ENST00000330295 AOX1Q06278 1338 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 MAGEA10P43363 369 aaPredicted RBP19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 PAWRQ96IZ0 340 aaKnown RBP19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 CPA4Q9UI42 421 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 CSADQ9Y600 493 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 SPEF2Q9C093 1822 aa19.25■□□□□ 0.67
CTHRC1-201ENST00000330295 CERS5Q8N5B7 392 aa19.24■□□□□ 0.67
CTHRC1-201ENST00000330295 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
CTHRC1-201ENST00000330295 BABAM1Q9NWV8 329 aa19.24■□□□□ 0.67
CTHRC1-201ENST00000330295 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 PLA2G5P39877 138 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 PRKCZQ05513 592 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 FAM109BQ6ICB4 259 aaPredicted RBP19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 NECAB2Q7Z6G3 386 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms