RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MED14O60244 1454 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-201ENST00000328300 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 BAG6P46379 1132 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 NEURL1BA8MQ27 555 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 SYKP43405 635 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 CAMK4Q16566 473 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 PDCL2Q8N4E4 241 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 ATP5JP18859 108 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 NAPAP54920 295 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-201ENST00000328300 SMARCC2Q8TAQ2 1214 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 H0YIN7 160 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 UFL1O94874 794 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 KIF5CO60282 957 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 H0YHG0 523 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
COL4A5-201ENST00000328300 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 NT5C2P49902 561 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 MBD4O95243 580 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 MTIF2P46199 727 aaKnown RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
COL4A5-201ENST00000328300 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
COL4A5-201ENST00000328300 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 SEMA3EO15041 775 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 CIAO1O76071 339 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 ALKQ9UM73 1620 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 ESPNB1AK53 854 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 GLI2P10070 1586 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 SGSM2O43147 1006 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 DEXIO95424 95 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 AK2P54819 239 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 CTSWP56202 376 aa13.04□□□□□ -0.32
COL4A5-201ENST00000328300 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 C16orf71Q8IYS4 520 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-201ENST00000328300 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-201ENST00000328300 STAT6P42226 847 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
COL4A5-201ENST00000328300 PICALMQ13492 652 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 SPTLC2O15270 562 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 A1BGP04217 495 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ALS2CR12Q96Q35 445 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ERBB3P21860 1342 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ZNF165P49910 485 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-201ENST00000328300 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
COL4A5-201ENST00000328300 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 BICDL2A1A5D9 508 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 PSMA7O14818 248 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 PTPN14Q15678 1187 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 LEKR1Q6ZMV7 388 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 SPATA5Q8NB90 893 aa13.02□□□□□ -0.32
COL4A5-201ENST00000328300 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-201ENST00000328300 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms