RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
CUL4A-201ENST00000326335 USP28Q96RU2 1077 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 NAPBQ9H115 298 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 RASGRF1Q13972 1273 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 CLEC17AQ6ZS10 378 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 CPDO75976 1380 aa12.51□□□□□ -0.41
CUL4A-201ENST00000326335 PDE8BO95263 885 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
CUL4A-201ENST00000326335 ZSCAN30Q86W11 494 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
CUL4A-201ENST00000326335 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
CUL4A-201ENST00000326335 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.417e-8■■□□□ 12.3
CUL4A-201ENST00000326335 PDE8AO60658 829 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 EVX2Q03828 476 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
CUL4A-201ENST00000326335 NSUN7Q8NE18 718 aaKnown RBP12.5□□□□□ -0.41
CUL4A-201ENST00000326335 TRPM3Q9HCF6 1732 aaPredicted RBP12.5□□□□□ -0.41
CUL4A-201ENST00000326335 PDE6AP16499 860 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
CUL4A-201ENST00000326335 TRIM5Q9C035 493 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 RIPOR2Q9Y4F9 1068 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 GNPATO15228 680 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 STK38Q15208 465 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
CUL4A-201ENST00000326335 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 IFIT3O14879 490 aaKnown RBP12.49□□□□□ -0.41
CUL4A-201ENST00000326335 KLRK1P26718 216 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
CUL4A-201ENST00000326335 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
CUL4A-201ENST00000326335 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 APPBP2Q92624 585 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 HELLSQ9NRZ9 838 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 CYP7A1P22680 504 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 ZRSR1Q15695 479 aaKnown RBP12.48□□□□□ -0.41
CUL4A-201ENST00000326335 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 CYB5R4Q7L1T6 521 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 SPATA5Q8NB90 893 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 SLC26A6Q9BXS9 759 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
CUL4A-201ENST00000326335 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
CUL4A-201ENST00000326335 MCM5P33992 734 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
CUL4A-201ENST00000326335 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
CUL4A-201ENST00000326335 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
CUL4A-201ENST00000326335 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 AP5Z1O43299 807 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CCDC192P0DO97 292 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 SLC5A1P13866 664 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CLCN1P35523 988 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 TYRO3Q06418 890 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CHRNDQ07001 517 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 PDILTQ8N807 584 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 ISY1Q9ULR0 285 aaKnown RBP12.47□□□□□ -0.41
CUL4A-201ENST00000326335 KCNJ14Q9UNX9 436 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 NRBP1Q9UHY1 535 aa12.47□□□□□ -0.41
CUL4A-201ENST00000326335 SYNE3Q6ZMZ3 975 aa12.46□□□□□ -0.41
CUL4A-201ENST00000326335 CCDC73Q6ZRK6 1079 aa12.46□□□□□ -0.41
CUL4A-201ENST00000326335 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
CUL4A-201ENST00000326335 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
CUL4A-201ENST00000326335 FOXP2O15409 715 aa12.46□□□□□ -0.41
CUL4A-201ENST00000326335 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.41
CUL4A-201ENST00000326335 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
CUL4A-201ENST00000326335 NEDD4P46934 1319 aa12.46□□□□□ -0.42
CUL4A-201ENST00000326335 BECN2A8MW95 431 aa12.46□□□□□ -0.42
CUL4A-201ENST00000326335 MAP3K12Q12852 859 aa12.46□□□□□ -0.42
CUL4A-201ENST00000326335 PUM3Q15397 648 aaKnown RBP12.46□□□□□ -0.42
CUL4A-201ENST00000326335 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.42
CUL4A-201ENST00000326335 ZNF592Q92610 1267 aa12.46□□□□□ -0.42
CUL4A-201ENST00000326335 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.42
CUL4A-201ENST00000326335 SCAND2PQ9GZW5 306 aaPredicted RBP12.45□□□□□ -0.42
CUL4A-201ENST00000326335 KINO60870 393 aaKnown RBP12.45□□□□□ -0.42
CUL4A-201ENST00000326335 ANTXR2P58335 489 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 LRMPQ12912 555 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 ZNF165P49910 485 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 KIAA2012Q0VF49 1180 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 CCDC152Q4G0S7 254 aa12.45□□□□□ -0.42
CUL4A-201ENST00000326335 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 RAD21O60216 631 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms