RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 SGO2Q562F6 1265 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 VN1R5Q7Z5H4 357 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 TMEM102Q8N9M5 508 aaPredicted RBP6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 ZKSCAN3Q9BRR0 538 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 SOX1O00570 391 aaPredicted RBP6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 GAS2O43903 313 aaKnown RBP6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 WNT11O96014 354 aa6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 MPSTP25325 297 aa6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 MAP4P27816 1152 aaKnown RBP6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 MZF1P28698 734 aaPredicted RBP6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 OSMRQ99650 979 aa6.8□□□□□ -1.32
CBX3P1-201ENST00000325243 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 EREGO14944 169 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 DLGAP3O95886 979 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 PCSK2P16519 638 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 ARL4DP49703 201 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 TMPRSS13Q9BYE2 586 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 RNF114Q9Y508 228 aa6.79□□□□□ -1.32
CBX3P1-201ENST00000325243 LOC100289279A0A1B0GTE1 492 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 TIAF1O95411 115 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 F13BP05160 661 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 MTMR3Q13615 1198 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 IKBKEQ14164 716 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 PMEPA1Q969W9 287 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 USP26Q9BXU7 913 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 PIM2Q9P1W9 311 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
CBX3P1-201ENST00000325243 TNFRSF21O75509 655 aa6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 NUTM2GQ5VZR2 741 aa6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 FOXD3Q9UJU5 478 aaPredicted RBP6.77□□□□□ -1.33
CBX3P1-201ENST00000325243 DRD2P14416 443 aa6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 RXRBP28702 533 aa6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 MSMPQ1L6U9 139 aa6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 ABI1Q8IZP0 508 aa6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 TTC16Q8NEE8 873 aa6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 CCDC97Q96F63 343 aaPredicted RBP6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 BHLHE41Q9C0J9 482 aaPredicted RBP6.76□□□□□ -1.33
CBX3P1-201ENST00000325243 PHACTR2O75167 634 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 ASAP3Q8TDY4 903 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 SNX29Q8TEQ0 813 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 CYP4F12Q9HCS2 524 aa6.75□□□□□ -1.33
CBX3P1-201ENST00000325243 METTL12A8MUP2 240 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 EDN3P14138 238 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 FOSL1P15407 271 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 FBLIM1Q8WUP2 373 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 ATG3Q9NT62 314 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 LEMD3Q9Y2U8 911 aa6.74□□□□□ -1.33
CBX3P1-201ENST00000325243 FAM95CA0A1B0GW59 222 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 SSFA2P28290 1259 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 NFKBIBQ15653 356 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 ALKBH2Q6NS38 261 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 C2CD4AQ8NCU7 369 aaPredicted RBP6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 NRSN2Q9GZP1 204 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 SERPINA10Q9UK55 444 aa6.73□□□□□ -1.33
CBX3P1-201ENST00000325243 TMEM88BA6NKF7 163 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 FZD6O60353 706 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 NPR3P17342 541 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 ADMP35318 185 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 GSTM4Q03013 218 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 EXOSC6Q5RKV6 272 aaKnown RBP6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
CBX3P1-201ENST00000325243 ARID1BQ8NFD5 2236 aaPredicted RBP6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 USP11P51784 963 aa6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 PAOXQ6QHF9 649 aa6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 ANGEL1Q9UNK9 670 aaKnown RBP6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
CBX3P1-201ENST00000325243 PRNPP04156 253 aa6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 POLR3DP05423 398 aaPredicted RBP6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 CTSBP07858 339 aa6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 SOX4Q06945 474 aaPredicted RBP6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 AAMPQ13685 434 aa6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 EZH1Q92800 747 aaPredicted RBP6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 GATA6Q92908 595 aa6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 PRKAG2Q9UGJ0 569 aa6.7□□□□□ -1.34
CBX3P1-201ENST00000325243 ARID3CA6NKF2 412 aa6.69□□□□□ -1.34
CBX3P1-201ENST00000325243 FAM170BA6NMN3 283 aa6.69□□□□□ -1.34
CBX3P1-201ENST00000325243 ADH5P11766 374 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms