RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 FAM184AQ8NB25 1140 aa14.19□□□□□ -0.14
NCL-201ENST00000322723 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
NCL-201ENST00000322723 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
NCL-201ENST00000322723 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
NCL-201ENST00000322723 NTSR2O95665 410 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 UBE3CQ15386 1083 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 ALX1Q15699 326 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 LRRFIP1Q32MZ4 808 aaKnown RBP14.18□□□□□ -0.14
NCL-201ENST00000322723 NEUROD6Q96NK8 337 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 KCNJ4P48050 445 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 ITPK1Q13572 414 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 ATP2B3Q16720 1220 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 CCDC87Q9NVE4 849 aa14.18□□□□□ -0.14
NCL-201ENST00000322723 ANKRD18BA2A2Z9 1011 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 ZAP70P43403 619 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
NCL-201ENST00000322723 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
NCL-201ENST00000322723 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 LRRC37AA6NMS7 1700 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 KIAA2012Q0VF49 1180 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 TCEANC2Q96MN5 208 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 DDX60LQ5H9U9 1706 aaKnown RBP14.17□□□□□ -0.14
NCL-201ENST00000322723 ANTXR2P58335 489 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 CBX1P83916 185 aa14.17□□□□□ -0.14
NCL-201ENST00000322723 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 MAP7D2Q96T17 732 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
NCL-201ENST00000322723 JAK2O60674 1132 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
NCL-201ENST00000322723 NOL7Q9UMY1 257 aaKnown RBP14.16□□□□□ -0.14
NCL-201ENST00000322723 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 PARP10Q53GL7 1025 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 ZSCAN16Q9H4T2 348 aaPredicted RBP14.16□□□□□ -0.14
NCL-201ENST00000322723 LTBP1Q14766 1721 aa14.16□□□□□ -0.14
NCL-201ENST00000322723 COL1A1P02452 1464 aaPredicted RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 CDK5RAP2Q96SN8 1893 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 CRKLP46109 303 aaKnown RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 TTF1Q15361 905 aaPredicted RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 PIH1D3Q9NQM4 214 aaKnown RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 CTNNA3Q9UI47 895 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 DUOX1Q9NRD9 1551 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
NCL-201ENST00000322723 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
NCL-201ENST00000322723 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 FDPSP14324 419 aaKnown RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 KRT85P78386 507 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 PUM3Q15397 648 aaKnown RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 LEO1Q8WVC0 666 aaPredicted RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 LPIN2Q92539 896 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 SCAND2PQ9GZW5 306 aaPredicted RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 FGAP02671 866 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 HMGN5P82970 282 aaKnown RBP14.14□□□□□ -0.15
NCL-201ENST00000322723 BRF1Q92994 677 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 IGSF3O75054 1194 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 UQCRFS1P1P0C7P4 283 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 MCM5P33992 734 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
NCL-201ENST00000322723 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 SIK1P57059 783 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 CCDC102BQ68D86 513 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 FOCADQ5VW36 1801 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 DDB1Q16531 1140 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 TTLL5Q6EMB2 1281 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 ZSCAN25Q6NSZ9 544 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 LDHAL6AQ6ZMR3 332 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
NCL-201ENST00000322723 METTL24Q5JXM2 366 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 CLEC4GQ6UXB4 293 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 GPAA1O43292 621 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 PI16Q6UXB8 463 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 CHMP4CQ96CF2 233 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
NCL-201ENST00000322723 PNPLA7Q6ZV29 1317 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 GPTP24298 496 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 NKX2-3Q8TAU0 364 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 MYH6P13533 1939 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 APOBRQ0VD83 1088 aa14.12□□□□□ -0.15
NCL-201ENST00000322723 FIBPO43427 364 aa14.11□□□□□ -0.15
NCL-201ENST00000322723 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
NCL-201ENST00000322723 IRS2Q9Y4H2 1338 aa14.11□□□□□ -0.15
NCL-201ENST00000322723 PTPDC1A2A3K4 754 aa14.11□□□□□ -0.15
NCL-201ENST00000322723 PHKA1P46020 1223 aa14.11□□□□□ -0.15
NCL-201ENST00000322723 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
NCL-201ENST00000322723 UTP14AQ9BVJ6 771 aaKnown RBP14.11□□□□□ -0.15
NCL-201ENST00000322723 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.11□□□□□ -0.15
NCL-201ENST00000322723 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
NCL-201ENST00000322723 SF3B3Q15393 1217 aaKnown RBP14.1□□□□□ -0.15
NCL-201ENST00000322723 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
NCL-201ENST00000322723 MYH2Q9UKX2 1941 aa14.1□□□□□ -0.15
NCL-201ENST00000322723 PDE6AP16499 860 aa14.1□□□□□ -0.15
NCL-201ENST00000322723 LIG1P18858 919 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms