RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 CRHR2Q13324 411 aa25.14■■□□□ 1.62
SSNA1-201ENST00000322310 AOX1Q06278 1338 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 CAP1Q01518 475 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 CHRNDQ07001 517 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 G2E3Q7L622 706 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 MTMR14Q8NCE2 650 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 ERO1AQ96HE7 468 aa25.13■■□□□ 1.61
SSNA1-201ENST00000322310 EN2P19622 333 aaPredicted RBP25.12■■□□□ 1.61
SSNA1-201ENST00000322310 NBPF12Q5TAG4 269 aaPredicted RBP25.12■■□□□ 1.61
SSNA1-201ENST00000322310 CHMP4AQ9BY43 222 aa25.12■■□□□ 1.61
SSNA1-201ENST00000322310 PPP2R3BQ9Y5P8 575 aa25.12■■□□□ 1.61
SSNA1-201ENST00000322310 LAMB1P07942 1786 aa25.12■■□□□ 1.61
SSNA1-201ENST00000322310 IRS2Q9Y4H2 1338 aa25.12■■□□□ 1.61
SSNA1-201ENST00000322310 CFAP100Q494V2 611 aa25.11■■□□□ 1.61
SSNA1-201ENST00000322310 TSR2Q969E8 191 aaKnown RBP25.11■■□□□ 1.61
SSNA1-201ENST00000322310 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
SSNA1-201ENST00000322310 STK31Q9BXU1 1019 aa25.11■■□□□ 1.61
SSNA1-201ENST00000322310 VEZTQ9HBM0 779 aa25.11■■□□□ 1.61
SSNA1-201ENST00000322310 RBBP6Q7Z6E9 1792 aaKnown RBP25.1■■□□□ 1.61
SSNA1-201ENST00000322310 SPDYE2BA6NHP3 402 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 TAF5LO75529 589 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 SPDYE6P0CI01 402 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 CASP7P55210 303 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 GCKRQ14397 625 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 HELBQ8NG08 1087 aaPredicted RBP25.1■■□□□ 1.61
SSNA1-201ENST00000322310 ARMC5Q96C12 935 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 PRMT6Q96LA8 375 aaPredicted RBP25.1■■□□□ 1.61
SSNA1-201ENST00000322310 PTPN18Q99952 460 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 EFCC1Q9HA90 598 aa25.1■■□□□ 1.61
SSNA1-201ENST00000322310 USP2O75604 605 aaPredicted RBP25.09■■□□□ 1.61
SSNA1-201ENST00000322310 CSF1RP07333 972 aa25.09■■□□□ 1.61
SSNA1-201ENST00000322310 SUPT20HL1Q3ZLR7 823 aa25.09■■□□□ 1.61
SSNA1-201ENST00000322310 JAG2Q9Y219 1238 aa25.09■■□□□ 1.61
SSNA1-201ENST00000322310 ECM29Q5VYK3 1845 aa25.09■■□□□ 1.61
SSNA1-201ENST00000322310 MYO1BO43795 1136 aa25.08■■□□□ 1.61
SSNA1-201ENST00000322310 IREB2P48200 963 aaKnown RBP25.08■■□□□ 1.61
SSNA1-201ENST00000322310 OTUD7BQ6GQQ9 843 aa25.08■■□□□ 1.61
SSNA1-201ENST00000322310 UNCXA6NJT0 531 aa25.07■■□□□ 1.6
SSNA1-201ENST00000322310 SP3Q02447 781 aa25.07■■□□□ 1.6
SSNA1-201ENST00000322310 SLC4A2P04920 1241 aa25.06■■□□□ 1.6
SSNA1-201ENST00000322310 RASA3Q14644 834 aa25.06■■□□□ 1.6
SSNA1-201ENST00000322310 ANKRD13AQ8IZ07 590 aa25.06■■□□□ 1.6
SSNA1-201ENST00000322310 KIAA0100Q14667 2235 aaKnown RBP25.06■■□□□ 1.6
SSNA1-201ENST00000322310 TESPA1A2RU30 521 aaPredicted RBP25.05■■□□□ 1.6
SSNA1-201ENST00000322310 IL1R1P14778 569 aa25.05■■□□□ 1.6
SSNA1-201ENST00000322310 FXR1P51114 621 aaKnown RBP eCLIP25.05■■□□□ 1.6
SSNA1-201ENST00000322310 RBM5P52756 815 aaKnown RBP eCLIP25.05■■□□□ 1.6
SSNA1-201ENST00000322310 C15orf52Q6ZUT6 534 aaKnown RBP25.05■■□□□ 1.6
SSNA1-201ENST00000322310 ELP3Q9H9T3 547 aa25.05■■□□□ 1.6
SSNA1-201ENST00000322310 ANKRD18BA2A2Z9 1011 aa25.04■■□□□ 1.6
SSNA1-201ENST00000322310 ZNF804AQ7Z570 1209 aa25.04■■□□□ 1.6
SSNA1-201ENST00000322310 OPTNQ96CV9 577 aa25.04■■□□□ 1.6
SSNA1-201ENST00000322310 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
SSNA1-201ENST00000322310 TWISTNBQ3B726 338 aaPredicted RBP25.03■■□□□ 1.6
SSNA1-201ENST00000322310 MYH16Q9H6N6 1097 aa25.03■■□□□ 1.6
SSNA1-201ENST00000322310 A0A1B0GUL6 1792 aa25.03■■□□□ 1.6
SSNA1-201ENST00000322310 FLIIQ13045 1269 aa25.02■■□□□ 1.6
SSNA1-201ENST00000322310 CDAN1Q8IWY9 1227 aa25.02■■□□□ 1.6
SSNA1-201ENST00000322310 CNKSR2Q8WXI2 1034 aa25.02■■□□□ 1.6
SSNA1-201ENST00000322310 ZNF333Q96JL9 665 aa25.02■■□□□ 1.6
SSNA1-201ENST00000322310 MS4A4AQ96JQ5 239 aa25.02■■□□□ 1.6
SSNA1-201ENST00000322310 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
SSNA1-201ENST00000322310 FKBP1AP62942 108 aaKnown RBP25.01■■□□□ 1.59
SSNA1-201ENST00000322310 TMEM106CQ9BVX2 250 aa25.01■■□□□ 1.59
SSNA1-201ENST00000322310 CHMP3Q9Y3E7 222 aa25.01■■□□□ 1.59
SSNA1-201ENST00000322310 IFIT5Q13325 482 aaKnown RBP25■■□□□ 1.59
SSNA1-201ENST00000322310 FKBP5Q13451 457 aaPredicted RBP25■■□□□ 1.59
SSNA1-201ENST00000322310 LINS1Q8NG48 757 aa25■■□□□ 1.59
SSNA1-201ENST00000322310 DNAAF4Q8WXU2 420 aa25■■□□□ 1.59
SSNA1-201ENST00000322310 BRI3BPQ8WY22 251 aa25■■□□□ 1.59
SSNA1-201ENST00000322310 PTCH2Q9Y6C5 1203 aa25■■□□□ 1.59
SSNA1-201ENST00000322310 FOXO4P98177 505 aa24.99■■□□□ 1.59
SSNA1-201ENST00000322310 SLC9C1Q4G0N8 1177 aa24.99■■□□□ 1.59
SSNA1-201ENST00000322310 ZNF70Q9UC06 446 aaPredicted RBP24.99■■□□□ 1.59
SSNA1-201ENST00000322310 COLQQ9Y215 455 aaPredicted RBP24.99■■□□□ 1.59
SSNA1-201ENST00000322310 PLIN1O60240 522 aa24.98■■□□□ 1.59
SSNA1-201ENST00000322310 MYCP01106 439 aaPredicted RBP24.98■■□□□ 1.59
SSNA1-201ENST00000322310 SPDYE2Q495Y8 402 aa24.98■■□□□ 1.59
SSNA1-201ENST00000322310 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.98■■□□□ 1.59
SSNA1-201ENST00000322310 TDRD3Q9H7E2 651 aaKnown RBP24.98■■□□□ 1.59
SSNA1-201ENST00000322310 CCL15-CCL14A0A0B4J2E2 113 aa24.97■■□□□ 1.59
SSNA1-201ENST00000322310 TAF1CQ15572 869 aaPredicted RBP24.97■■□□□ 1.59
SSNA1-201ENST00000322310 CCL15Q16663 113 aa24.97■■□□□ 1.59
SSNA1-201ENST00000322310 ZNF594Q96JF6 807 aaPredicted RBP24.97■■□□□ 1.59
SSNA1-201ENST00000322310 TEPSINQ96N21 525 aa24.97■■□□□ 1.59
SSNA1-201ENST00000322310 TNFAIP1Q13829 316 aa24.96■■□□□ 1.59
SSNA1-201ENST00000322310 VGLL4Q14135 290 aa24.96■■□□□ 1.59
SSNA1-201ENST00000322310 FAM43AQ8N2R8 423 aa24.96■■□□□ 1.59
SSNA1-201ENST00000322310 ZFYVE28Q9HCC9 887 aa24.96■■□□□ 1.59
SSNA1-201ENST00000322310 SLC4A8Q2Y0W8 1093 aa24.95■■□□□ 1.58
SSNA1-201ENST00000322310 MFSD14BQ5SR56 506 aa24.95■■□□□ 1.58
SSNA1-201ENST00000322310 NBPF11Q86T75 865 aa24.95■■□□□ 1.58
SSNA1-201ENST00000322310 TMEM39BQ9GZU3 492 aa24.95■■□□□ 1.58
SSNA1-201ENST00000322310 TTF2Q9UNY4 1162 aaKnown RBP24.95■■□□□ 1.58
SSNA1-201ENST00000322310 FAM205AQ6ZU69 1335 aa24.94■■□□□ 1.58
SSNA1-201ENST00000322310 TCP10L2B9ZVM9 353 aa24.94■■□□□ 1.58
SSNA1-201ENST00000322310 LMBR1LQ6UX01 489 aa24.94■■□□□ 1.58
SSNA1-201ENST00000322310 OTUD5Q96G74 571 aa24.94■■□□□ 1.58
SSNA1-201ENST00000322310 GTF2A2P52657 109 aa24.93■■□□□ 1.58
SSNA1-201ENST00000322310 EPHA10Q5JZY3 1008 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms